Factsheet for AT3G04650.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001116.1-P	Field mustard	plastid	91.98	91.6
CDX74176	Canola	plastid	91.98	91.6
CDY40666	Canola	plastid	91.36	90.98
KRH68746	Soybean	cytosol, peroxisome, plastid	16.26	67.52
VIT_14s0081g00490.t01	Wine grape	plastid	64.81	67.45
CDY42167	Canola	extracellular	28.81	66.04
KRG96985	Soybean	mitochondrion	46.71	65.42
PGSC0003DMT400070768	Potato	plastid	60.08	65.32
GSMUA_Achr8P03160_001	Banana	plastid	60.08	59.59
Solyc01g097160.2.1	Tomato	plastid	60.91	59.2
EES16280	Sorghum	plastid	56.38	57.93
Os12t0597400-01	Rice	plastid	57.2	55.94
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	54.73	55.88
TraesCS5D01G071300.1	Wheat	plastid	54.94	55.74
TraesCS5A01G059800.2	Wheat	plastid	54.94	55.74
Zm00001d030962_P001	Maize	plastid	57.2	55.05
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	55.35	53.69
VIT_12s0055g01120.t01	Wine grape	cytosol	10.29	37.31
AT1G56000.1	Thale cress	plastid	20.99	26.56
AT1G55980.1	Thale cress	mitochondrion	18.31	19.02

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:35.2	EntrezGene:819623	ProteinID:AAF04895.1	ProteinID:AEE74114.1
ArrayExpress:AT3G04650	EnsemblPlantsGene:AT3G04650	RefSeq:AT3G04650	TAIR:AT3G04650	RefSeq:AT3G04650-TAIR-G	EnsemblPlants:AT3G04650.1
TAIR:AT3G04650.1	EMBL:AY050342	Unigene:At.26589	EMBL:BT004515	InterPro:FAD/NAD-bd_sf	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:IPR036188
RefSeq:NP_566235.1	PFAM:PF13450	PO:PO:0000013	PO:PO:0000037	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR16128	PANTHER:PTHR16128:SF8
UniProt:Q9SR09	SUPFAM:SSF51905	UniParc:UPI000000C384	SEG:seg	:	:

Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]

Coordinates

chr3:+:1261857..1264687

Molecular Weight (calculated)

52365.8 Da

IEP (calculated)

8.666

GRAVY (calculated)

-0.159

Length

486 amino acids

Sequence
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.