Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08271 | Canola | mitochondrion, plastid | 89.84 | 89.38 |
| CDY26077 | Canola | mitochondrion, plastid | 89.58 | 89.12 |
| Bra037093.1-P | Field mustard | mitochondrion, plastid | 88.8 | 88.34 |
| AT1G55980.1 | Thale cress | mitochondrion | 85.42 | 70.09 |
| VIT_19s0027g00380.t01 | Wine grape | plastid | 64.32 | 66.94 |
| KRH43821 | Soybean | plastid | 64.06 | 66.67 |
| Solyc10g005620.2.1 | Tomato | plastid | 60.42 | 62.87 |
| PGSC0003DMT400029217 | Potato | plastid | 60.16 | 62.6 |
| GSMUA_Achr7P07990_001 | Banana | plastid | 59.38 | 61.13 |
| Os03t0784000-03 | Rice | plastid | 56.51 | 56.81 |
| Zm00001d034338_P001 | Maize | plastid | 55.21 | 56.23 |
| TraesCS5B01G423800.1 | Wheat | plastid | 54.43 | 55.59 |
| KXG37426 | Sorghum | plastid | 53.65 | 54.5 |
| TraesCS5A01G421900.3 | Wheat | cytosol, peroxisome, plastid | 45.31 | 53.7 |
| TraesCS5D01G430200.1 | Wheat | peroxisome, plastid | 54.95 | 51.46 |
| HORVU5Hr1G103040.10 | Barley | mitochondrion, peroxisome | 52.34 | 45.89 |
| HORVU5Hr1G103050.2 | Barley | cytosol, plastid | 11.46 | 26.67 |
| AT3G04650.1 | Thale cress | plastid | 26.56 | 20.99 |
Protein Annotations
| Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | MapMan:35.2 | EntrezGene:842049 | EntrezGene:842051 | ProteinID:AEE33329.1 |
| EMBL:AK316780 | ArrayExpress:AT1G56000 | EnsemblPlantsGene:AT1G56000 | RefSeq:AT1G56000 | TAIR:AT1G56000 | RefSeq:AT1G56000-TAIR-G |
| EnsemblPlants:AT1G56000.1 | TAIR:AT1G56000.1 | EMBL:AY069897 | EMBL:AY142026 | Unigene:At.71152 | InterPro:FAD/NAD-bd_sf |
| InterPro:IPR036188 | RefSeq:NP_175996.2 | PFAM:PF13450 | PO:PO:0000293 | PRINTS:PR00419 | PANTHER:PTHR16128 |
| PANTHER:PTHR16128:SF5 | UniProt:Q8VYV2 | SUPFAM:SSF51905 | UniParc:UPI00000A7FA6 | SEG:seg | : |
Description
AT1G56000 protein [Source:UniProtKB/TrEMBL;Acc:Q8VYV2]
Coordinates
chr1:+:20944136..20946718
Molecular Weight (calculated)
41482.9 Da
IEP (calculated)
7.298
GRAVY (calculated)
-0.021
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATTISPAI RKQMSSVAVA MKVAVIGSGI SGAVCASTLA RNGVSVTIFD SGRGPGGRMS QRREIGEDGK ELMFDHGAPF FCVSNSDAMA LVHEWESRGF
101: VSEWKQVFGS FDCASNKFLG IQQEGDAKKY VGVPGMNSIS KALCNESGVK SMFGTGIAKM EWLEEEIPWL LTDSKGENLG RFDGVVASDK NIVSPRFTQV
201: TGLPPPLDLS LVPELATKLQ NIPVLPCFSL MLAFKEPLSS IPVKGLSFKN SEILSWAHCE STKPGRSTDS ERWILHSTPD YANSVIAKTG LQKLSSETLN
301: KISEEMFKEF QCSGLVSSLP FFMKAHRWGS AFPAKSIAVE ERCLWDRNRN LAICGDFCVS PNVEGAILSG LAAASKLLQT SSCL
101: VSEWKQVFGS FDCASNKFLG IQQEGDAKKY VGVPGMNSIS KALCNESGVK SMFGTGIAKM EWLEEEIPWL LTDSKGENLG RFDGVVASDK NIVSPRFTQV
201: TGLPPPLDLS LVPELATKLQ NIPVLPCFSL MLAFKEPLSS IPVKGLSFKN SEILSWAHCE STKPGRSTDS ERWILHSTPD YANSVIAKTG LQKLSSETLN
301: KISEEMFKEF QCSGLVSSLP FFMKAHRWGS AFPAKSIAVE ERCLWDRNRN LAICGDFCVS PNVEGAILSG LAAASKLLQT SSCL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.