Factsheet for Os03t0784000-03

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
peroxisome 1
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G423800.1	Wheat	plastid	83.77	85.11
Zm00001d034338_P001	Maize	plastid	83.25	84.35
TraesCS5A01G421900.3	Wheat	cytosol, peroxisome, plastid	71.47	84.26
KXG37426	Sorghum	plastid	82.46	83.33
TraesCS5D01G430200.1	Wheat	peroxisome, plastid	83.51	77.8
HORVU5Hr1G103040.10	Barley	mitochondrion, peroxisome	79.58	69.41
GSMUA_Achr7P07990_001	Banana	plastid	65.97	67.56
VIT_19s0027g00380.t01	Wine grape	plastid	59.42	61.52
KRH43821	Soybean	plastid	57.33	59.35
Solyc10g005620.2.1	Tomato	plastid	57.07	59.08
PGSC0003DMT400029217	Potato	plastid	56.81	58.81
AT1G56000.1	Thale cress	plastid	56.81	56.51
CDY08271	Canola	mitochondrion, plastid	55.76	55.18
CDY26077	Canola	mitochondrion, plastid	55.5	54.92
Bra037093.1-P	Field mustard	mitochondrion, plastid	55.5	54.92
HORVU5Hr1G103050.2	Barley	cytosol, plastid	17.02	39.39
AT1G55980.1	Thale cress	mitochondrion	48.17	39.32
Os12t0597400-01	Rice	plastid	28.8	22.13

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:35.2	EntrezGene:4334332	ProteinID:ABF99212.1	InterPro:Amino_oxidase
ProteinID:BAF13384.1	ProteinID:BAS86707.1	InterPro:FAD/NAD-bd_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188	EnsemblPlantsGene:Os03g0784000	EnsemblPlants:Os03t0784000-03
PFAM:PF01593	PFAM:PF13450	PANTHER:PTHR16128	PANTHER:PTHR16128:SF5	UniProt:Q10CG2	SUPFAM:SSF51905
TMHMM:TMhelix	UniParc:UPI0000DB439D	RefSeq:XP_015629819.1	RefSeq:XP_015629820.1	RefSeq:XP_015629821.1	RefSeq:XP_015629822.1
RefSeq:XP_015629823.1	RefSeq:XP_015629824.1	SEG:seg	:	:	:

Description

Similar to deoxyribodipyrimidine photolyase. (Os03t0784000-01);Similar to deoxyribodipyrimidine photolyase. (Os03t0784000-02);FAD dependent oxidoreductase family protein. (Os03t0784000-03)

Coordinates

chr3:+:32532286..32539857

Molecular Weight (calculated)

40859.1 Da

IEP (calculated)

7.641

GRAVY (calculated)

0.074

Length

382 amino acids

Sequence
(BLAST)

001: MSAAAAAAAA SAANVAVIGG GISGAVCASL LAARGVAVTL FDSGRGAGGR MAQRREVMED GTELRFDHGA PYFTVSNDEV ARVVSGWEAR GLVAEWKAMF
101: ACFDREAGKF TDFEKEGTIK KYVGVPGMNS ICKSLCLEDG VVAKFGVTIG RMDWIQDRSS WLLASLDGRD LGHFDYVVAT DKNIASPRFS GLTGRPPPLD
201: LSLLPQLSMM IQDIPVRPCF ALMLAFSEPL TKVPVQGFSF NNSDYLSWAF CDSSKPGRAH VPLNSQSWVL HSTAEYASKV INNIGPRKPS ADALAKVAEE
301: LLKEFQATGL NIPQPIFMKA HRWGSAFPAI AISGDDKCVW DKSMKLAICG DFCTSPSVEG AVLSGMRGAS KILRCLNFPS GL

Best Arabidopsis Sequence Match ( AT1G56000.1 )
(BLAST)

001: MAATTISPAI RKQMSSVAVA MKVAVIGSGI SGAVCASTLA RNGVSVTIFD SGRGPGGRMS QRREIGEDGK ELMFDHGAPF FCVSNSDAMA LVHEWESRGF
101: VSEWKQVFGS FDCASNKFLG IQQEGDAKKY VGVPGMNSIS KALCNESGVK SMFGTGIAKM EWLEEEIPWL LTDSKGENLG RFDGVVASDK NIVSPRFTQV
201: TGLPPPLDLS LVPELATKLQ NIPVLPCFSL MLAFKEPLSS IPVKGLSFKN SEILSWAHCE STKPGRSTDS ERWILHSTPD YANSVIAKTG LQKLSSETLN
301: KISEEMFKEF QCSGLVSSLP FFMKAHRWGS AFPAKSIAVE ERCLWDRNRN LAICGDFCVS PNVEGAILSG LAAASKLLQT SSCL

Arabidopsis Description

AT1G56000 protein [Source:UniProtKB/TrEMBL;Acc:Q8VYV2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.