Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G103040.10 | Barley | mitochondrion, peroxisome | 55.76 | 21.0 |
| TraesCS5B01G423800.1 | Wheat | plastid | 41.82 | 18.35 |
| TraesCS5A01G421900.3 | Wheat | cytosol, peroxisome, plastid | 33.94 | 17.28 |
| Os03t0784000-03 | Rice | plastid | 39.39 | 17.02 |
| TraesCS5D01G430200.1 | Wheat | peroxisome, plastid | 41.82 | 16.83 |
| Zm00001d034338_P001 | Maize | plastid | 36.97 | 16.18 |
| KXG37426 | Sorghum | plastid | 35.15 | 15.34 |
| GSMUA_Achr7P07990_001 | Banana | plastid | 29.09 | 12.87 |
| VIT_19s0027g00380.t01 | Wine grape | plastid | 28.48 | 12.74 |
| KRH43821 | Soybean | plastid | 27.27 | 12.2 |
| AT1G56000.1 | Thale cress | plastid | 26.67 | 11.46 |
| CDY26077 | Canola | mitochondrion, plastid | 26.67 | 11.4 |
| CDY08271 | Canola | mitochondrion, plastid | 26.67 | 11.4 |
| Bra037093.1-P | Field mustard | mitochondrion, plastid | 26.67 | 11.4 |
| PGSC0003DMT400029217 | Potato | plastid | 24.24 | 10.84 |
| Solyc10g005620.2.1 | Tomato | plastid | 24.24 | 10.84 |
| AT1G55980.1 | Thale cress | mitochondrion | 28.48 | 10.04 |
| HORVU5Hr1G015050.6 | Barley | mitochondrion, plastid | 21.21 | 6.99 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G103050.2 | EnsemblPlantsGene:HORVU5Hr1G103050 | Gene3D:3.90.660.10 | PANTHER:PTHR16128 | PANTHER:PTHR16128:SF5 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:614786622..614787295
Molecular Weight (calculated)
18432.7 Da
IEP (calculated)
11.807
GRAVY (calculated)
-0.961
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: XHTAAPHSAD SPTPTRTRRR EESDHERRRG QRRRYRSRND GRRVRVAPGR ARGGGDALRL GPRPRRTHGA AEVLDRFTAP SCRCSALTGV PFRRGGGARR
101: EVMDDGTGLR FDHGAPYFTV SNDEVARVVG GWEARGLVAE WKAMFACFDR ETGKFRDFDK VLSLK
101: EVMDDGTGLR FDHGAPYFTV SNDEVARVVG GWEARGLVAE WKAMFACFDR ETGKFRDFDK VLSLK
001: MAATTISPAI RKQMSSVAVA MKVAVIGSGI SGAVCASTLA RNGVSVTIFD SGRGPGGRMS QRREIGEDGK ELMFDHGAPF FCVSNSDAMA LVHEWESRGF
101: VSEWKQVFGS FDCASNKFLG IQQEGDAKKY VGVPGMNSIS KALCNESGVK SMFGTGIAKM EWLEEEIPWL LTDSKGENLG RFDGVVASDK NIVSPRFTQV
201: TGLPPPLDLS LVPELATKLQ NIPVLPCFSL MLAFKEPLSS IPVKGLSFKN SEILSWAHCE STKPGRSTDS ERWILHSTPD YANSVIAKTG LQKLSSETLN
301: KISEEMFKEF QCSGLVSSLP FFMKAHRW
101: VSEWKQVFGS FDCASNKFLG IQQEGDAKKY VGVPGMNSIS KALCNESGVK SMFGTGIAKM EWLEEEIPWL LTDSKGENLG RFDGVVASDK NIVSPRFTQV
201: TGLPPPLDLS LVPELATKLQ NIPVLPCFSL MLAFKEPLSS IPVKGLSFKN SEILSWAHCE STKPGRSTDS ERWILHSTPD YANSVIAKTG LQKLSSETLN
301: KISEEMFKEF QCSGLVSSLP FFMKAHRW
Arabidopsis Description
FAD/NAD(P)-binding oxidoreductase family protein [Source:TAIR;Acc:AT1G55980]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.