Factsheet for HORVU5Hr1G015050.6

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	90.22	94.96
TraesCS5D01G071300.1	Wheat	plastid	90.22	94.36
TraesCS5A01G059800.2	Wheat	plastid	90.22	94.36
EES16280	Sorghum	plastid	73.25	77.59
Os12t0597400-01	Rice	plastid	74.85	75.45
Zm00001d030962_P001	Maize	plastid	72.65	72.08
KRH68746	Soybean	cytosol, peroxisome, plastid	15.57	66.67
GSMUA_Achr8P03160_001	Banana	plastid	61.48	62.86
PGSC0003DMT400070768	Potato	plastid	54.69	61.3
VIT_14s0081g00490.t01	Wine grape	plastid	56.49	60.6
KRG96985	Soybean	mitochondrion	41.32	59.65
CDX74176	Canola	plastid	54.29	55.74
Bra001116.1-P	Field mustard	plastid	54.29	55.74
Solyc01g097160.2.1	Tomato	plastid	55.29	55.4
AT3G04650.1	Thale cress	plastid	53.69	55.35
CDY40666	Canola	plastid	53.69	55.12
CDY42167	Canola	extracellular	20.16	47.64
VIT_12s0055g01120.t01	Wine grape	cytosol	7.78	29.1
HORVU5Hr1G103040.10	Barley	mitochondrion, peroxisome	18.96	21.69
HORVU5Hr1G103050.2	Barley	cytosol, plastid	6.99	21.21

Protein Annotations

EnsemblPlants:HORVU5Hr1G015050.6	EnsemblPlantsGene:HORVU5Hr1G015050	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188
ncoils:Coil	PANTHER:PTHR16128	PANTHER:PTHR16128:SF8	PFAM:PF13450	SEG:seg	SUPFAM:SSF51905
UniParc:UPI000B47DBC3	UniProt:A0A287QFM9	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:56182639..56185815

Molecular Weight (calculated)

54152.8 Da

IEP (calculated)

8.982

GRAVY (calculated)

-0.233

Length

501 amino acids

Sequence
(BLAST)

001: AAMPLLHPAP CARPRFSGAV VAASGAGGAR PPKAPPRPPR DKPRFSRQSA IKKSFQQEQV VFSTPVPADP TVAVIGGGAS GLACASALAA RGVRSVVFDT
101: VRPFTLTPSL APRPYTSARG SLPFPPPLVQ GMHGLGGRMA TRMVDDGRRL VFDHAAQFFT ASDRRFQKLV DEWVEKGLAR EWRGAIGELE AGGHFTAIPS
201: STPRYIGVRG MRPLADAMLP EDDLIKVVRP SWISKLEPFN GLWRLFESEK PQGQYDAVVI AHNGKCANRL LSTSGLPQLT RQMKRLELSS VWALLAAFDD
301: PLPIPQDNSY GTFEGAFVKD IDSLSWMANN TQKIFPLETN RPECWTFFST ASYGKKNKVP QENIPNATAE KVKREMLGGV ELALGLSKGS LQRPFYTRVQ
401: LWGAALPMNT PGVPCIFDPQ GRAGICGDWL TGSSIEAAVL SGMSLGDHVA DYFASGGERP EEFAIGLDDS LNRVEGHDIG QFPGLDSQKP QVAEPQLAPS
501: I

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.