Factsheet for Os12t0597400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16280	Sorghum	plastid	75.86	79.7
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	76.26	79.62
TraesCS5D01G071300.1	Wheat	plastid	76.26	79.12
TraesCS5A01G059800.2	Wheat	plastid	76.06	78.91
Zm00001d030962_P001	Maize	plastid	76.06	74.85
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	75.45	74.85
KRH68746	Soybean	cytosol, peroxisome, plastid	16.5	70.09
VIT_14s0081g00490.t01	Wine grape	plastid	59.76	63.6
GSMUA_Achr8P03160_001	Banana	plastid	61.97	62.86
PGSC0003DMT400070768	Potato	plastid	56.14	62.42
KRG96985	Soybean	mitochondrion	43.46	62.25
CDX74176	Canola	plastid	56.54	57.58
Bra001116.1-P	Field mustard	plastid	56.54	57.58
AT3G04650.1	Thale cress	plastid	55.94	57.2
CDY40666	Canola	plastid	56.14	57.17
Solyc01g097160.2.1	Tomato	plastid	56.94	56.6
CDY42167	Canola	extracellular	21.13	49.53
Os03t0784000-03	Rice	plastid	22.13	28.8
VIT_12s0055g01120.t01	Wine grape	cytosol	7.24	26.87

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:35.2	EntrezGene:4352705	ProteinID:ABA99239.1	EMBL:AK071949
ProteinID:BAF30213.1	ProteinID:BAT17932.1	InterPro:FAD/NAD-bd_sf	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:IPR036188	EnsemblPlantsGene:Os12g0597400	EnsemblPlants:Os12t0597400-01
PFAM:PF13450	PANTHER:PTHR16128	PANTHER:PTHR16128:SF8	UniProt:Q2QMN9	SUPFAM:SSF51905	UniParc:UPI0000680CD1
RefSeq:XP_015620210.1	SEG:seg	:	:	:	:

Description

HI0933-like protein family protein. (Os12t0597400-01)

Coordinates

chr12:-:25082544..25085996

Molecular Weight (calculated)

53315.6 Da

IEP (calculated)

8.293

GRAVY (calculated)

-0.228

Length

497 amino acids

Sequence
(BLAST)

001: MPPTPPPLLL PAPRCPRSTA VLAASRFAAS ASSSSGGGGG GSSSGARTAR PPPAPRRRRG KPGFSRQSAI KKSFHQEQVV FSTPVPPDPS VAVVGGGASG
101: LACAASLAAR GVRAVVFDTG MHGLGGRMAT RAIAAAGDQQ QQQQLVFDHA AQFFTASDER FKRVVDEWMD KGLVREWGGL IGELDAGGHF RPMPSSSPPR
201: YIGVDGMRPL ADAILPESDL IEVVRPCWIS KLEPFNGLWR LFENEKPHGQ YDAIVIAHNG KCANRLLSTS GLPLLTRQMK RLQLSSVWAL LAAFQDPLPI
301: PQTDSYGTFE GAFVKDVDSL SWMANNTQKL FPLQTGRPEC WTFFSTAAYG KRNKVPQENI PKITAEKVKE DMLRGVELAL GLSRGSLQQP FYTRVQLWGA
401: ALPMNTPGVP CIFDPQGRAG ICGDWLTGSS IEAAVLSGMS LANHIADYFA SSGEQPEEFA IGLHENLSQV EGHDIGQFPG LESQKPHVAE AQLTPST

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.