Factsheet for Zm00001d030962_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16280	Sorghum	plastid	86.14	91.97
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	73.07	77.52
TraesCS5A01G059800.2	Wheat	plastid	73.27	77.24
TraesCS5D01G071300.1	Wheat	plastid	72.87	76.83
Os12t0597400-01	Rice	plastid	74.85	76.06
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	72.08	72.65
KRH68746	Soybean	cytosol, peroxisome, plastid	15.05	64.96
VIT_14s0081g00490.t01	Wine grape	plastid	58.02	62.74
GSMUA_Achr8P03160_001	Banana	plastid	60.2	62.04
PGSC0003DMT400070768	Potato	plastid	54.65	61.74
KRG96985	Soybean	mitochondrion	41.78	60.81
CDX74176	Canola	plastid	55.64	57.58
Bra001116.1-P	Field mustard	plastid	55.45	57.38
AT3G04650.1	Thale cress	plastid	55.05	57.2
CDY40666	Canola	plastid	55.05	56.97
Solyc01g097160.2.1	Tomato	plastid	54.85	55.4
CDY42167	Canola	extracellular	20.4	48.58
VIT_12s0055g01120.t01	Wine grape	cytosol	7.72	29.1
Zm00001d034338_P001	Maize	plastid	20.2	27.06

Protein Annotations

EntrezGene:100272440	Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:35.2	EMBL:BT065184	UniProt:C0PA65
InterPro:FAD/NAD-bd_sf	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0009507
GO:GO:0009536	InterPro:IPR036188	ProteinID:ONM01822.1	PFAM:PF13450	PANTHER:PTHR16128	PANTHER:PTHR16128:SF8
SUPFAM:SSF51905	UniParc:UPI000194B495	EnsemblPlantsGene:Zm00001d030962	EnsemblPlants:Zm00001d030962_P001	EnsemblPlants:Zm00001d030962_T001	SEG:seg

Description

FAD/NAD(P)-binding oxidoreductase family protein

Coordinates

chr1:-:169327810..169330606

Molecular Weight (calculated)

54953.1 Da

IEP (calculated)

6.986

GRAVY (calculated)

-0.068

Length

505 amino acids

Sequence
(BLAST)

001: MPPSPIVLPA TALPAARLAR VVAASESGGA TPPRASPRRG RRGKPGFSRR SAIKKSFHQE QVVFSTPVST DPTVAVIGGG ASGLSCATSL AARGVRSVVF
101: DTGMHGLGGR MATRFVDGGK QLVFDHAAQF FTASDERFQR LVNEWLDRGL VREWSGLIGE LEAGGCFRPI PSLTPRYIGV NGMRPLADAM LPETDMIKVL
201: RPCWISKLEP FNGLWRLFEN EKPRGEYDAV VIAHNGKCAN RLLSTSGLPL LTKQMKVPWF YYCNNFLTHE AYILLFLLLT KFPAVNDQRL ELSSVWALLA
301: AFEDPLPIPL LDSNAAFEGA FVRDVDSLSW MGNNTRKLFP MQTGAPECWT FFSTAAYGKR NKVPQENIPK LTAEKVKEDM LGGVEHALGL SEGSLQQPIY
401: TRVQLWGAAL PMNTPGVPCI FDPLGRAGIC GDWLTGSSIE AAVLSGMSLA NHIADYFVST QDRPEEFAIG VHDDLNAVEG HDIGQFPGLD TQTPQVAEAQ
501: LTPSI

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.