CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68746	Soybean	cytosol, peroxisome, plastid	30.26	89.74
PGSC0003DMT400070768	Potato	plastid	67.44	52.35
VIT_14s0081g00490.t01	Wine grape	plastid	68.88	51.18
Bra001116.1-P	Field mustard	plastid	65.99	46.93
CDY40666	Canola	plastid	65.99	46.93
CDX74176	Canola	plastid	65.99	46.93
Solyc01g097160.2.1	Tomato	plastid	67.44	46.8
AT3G04650.1	Thale cress	plastid	65.42	46.71
GSMUA_Achr8P03160_001	Banana	plastid	63.4	44.9
EES16280	Sorghum	plastid	60.81	44.61
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	60.23	43.91
TraesCS5D01G071300.1	Wheat	plastid	60.23	43.63
Os12t0597400-01	Rice	plastid	62.25	43.46
TraesCS5A01G059800.2	Wheat	plastid	59.94	43.42
Zm00001d030962_P001	Maize	plastid	60.81	41.78
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	59.65	41.32
CDY42167	Canola	extracellular	24.78	40.57
KRH43821	Soybean	plastid	19.31	18.16
VIT_12s0055g01120.t01	Wine grape	cytosol	1.15	2.99

Protein Annotations

EMBL:ACUP02012171	EnsemblPlants:KRG96985	EnsemblPlantsGene:GLYMA_19G245900	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:FAD/NAD-bd_sf
InterPro:IPR036188	PANTHER:PTHR16128	PANTHER:PTHR16128:SF8	ProteinID:KRG96985	ProteinID:KRG96985.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF51905	UniParc:UPI00023DE19A	UniProt:I1NCA5	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr19:-:49266953..49270663

Molecular Weight (calculated)

37479.1 Da

IEP (calculated)

7.435

GRAVY (calculated)

-0.040

Length

347 amino acids

Sequence
(BLAST)

001: MRLSSLLSAI LASLRSSTRG WRRVWCASGW VPLETFNNGG EFVPFLPSPA RYVATKGMRF LADSLLSHSR LVNVVRPCWI SKLEPFNGMW HLSENGKPRG
101: EFDAIVIAHN GKCANRLLMT SGLPLIAKQM KRLDLSSIWA LLAAFEDPLP FPGSTEVPFE GAFVRGVDSV SWMANNTKKL EISECGGPHC WTFLSTAAYG
201: KQNKVPQENI PSATAAKVKA GMLDGVESAL GLSKGSLPKP LYTRLQLWGA ALPTNTPGVP CIFDPFGRAG ICGDWLLGSN IEAAVLSGIA LANHIADYFQ
301: SPGTDPGEFA VGLNNEFQPL EGHDIGQFPG LGSEEKMSEG QAYELAK

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.