Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_14s0081g00490.t01 | Wine grape | plastid | 44.03 | 12.63 |
| PGSC0003DMT400070768 | Potato | plastid | 38.81 | 11.63 |
| Solyc01g097160.2.1 | Tomato | plastid | 41.04 | 11.0 |
| AT3G04650.1 | Thale cress | plastid | 37.31 | 10.29 |
| Bra001116.1-P | Field mustard | plastid | 35.07 | 9.63 |
| CDX74176 | Canola | plastid | 35.07 | 9.63 |
| CDY40666 | Canola | plastid | 34.33 | 9.43 |
| GSMUA_Achr8P03160_001 | Banana | plastid | 32.84 | 8.98 |
| TraesCS5A01G059800.2 | Wheat | plastid | 29.85 | 8.35 |
| TraesCS5B01G067100.1 | Wheat | mitochondrion, plastid | 29.1 | 8.19 |
| TraesCS5D01G071300.1 | Wheat | plastid | 29.1 | 8.14 |
| EES16280 | Sorghum | plastid | 28.36 | 8.03 |
| HORVU5Hr1G015050.6 | Barley | mitochondrion, plastid | 29.1 | 7.78 |
| Zm00001d030962_P001 | Maize | plastid | 29.1 | 7.72 |
| Os12t0597400-01 | Rice | plastid | 26.87 | 7.24 |
| VIT_19s0027g00380.t01 | Wine grape | plastid | 15.67 | 5.69 |
| CDY42167 | Canola | extracellular | 6.72 | 4.25 |
| KRG96985 | Soybean | mitochondrion | 2.99 | 1.15 |
| KRH68746 | Soybean | cytosol, peroxisome, plastid | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:VIT_12s0055g01120 | EMBL:FN595228 | EnsemblPlants:VIT_12s0055g01120.t01 | EnsemblPlantsGene:VIT_12s0055g01120 | Gene3D:3.50.50.60 | Gene3D:3.90.660.10 |
| InterPro:FAD/NAD-bd_sf | InterPro:IPR036188 | PANTHER:PTHR16128 | PANTHER:PTHR16128:SF8 | ProteinID:CBI20066 | ProteinID:CBI20066.3 |
| UniParc:UPI0001BE19DE | UniProt:D7STF2 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr12:+:14716424..14719367
Molecular Weight (calculated)
15301.4 Da
IEP (calculated)
9.140
GRAVY (calculated)
-0.400
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLHTTTANG HLLHHTSQDP DSYPSFKLPI ETQSQESQEK HHTTLLRSRF LRNPSTKKSR YMFIAPLSDN LVVTIINGEI TGLSCVLYLE KKGVRSTVFD
101: TRVHGLRGRM GTRMIDPQPL IFDHVTQFFI VDDP
101: TRVHGLRGRM GTRMIDPQPL IFDHVTQFFI VDDP
001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL
Arabidopsis Description
AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.