Factsheet for TraesCS5D01G071300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G059800.2	Wheat	plastid	98.33	98.33
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	97.49	98.11
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	94.36	90.22
EES16280	Sorghum	plastid	77.04	78.01
Os12t0597400-01	Rice	plastid	79.12	76.26
Zm00001d030962_P001	Maize	plastid	76.83	72.87
KRH68746	Soybean	cytosol, peroxisome, plastid	16.08	65.81
GSMUA_Achr8P03160_001	Banana	plastid	63.88	62.45
PGSC0003DMT400070768	Potato	plastid	57.2	61.3
VIT_14s0081g00490.t01	Wine grape	plastid	59.08	60.6
KRG96985	Soybean	mitochondrion	43.63	60.23
Solyc01g097160.2.1	Tomato	plastid	57.83	55.4
CDX74176	Canola	plastid	56.37	55.33
Bra001116.1-P	Field mustard	plastid	56.37	55.33
AT3G04650.1	Thale cress	plastid	55.74	54.94
CDY40666	Canola	plastid	55.74	54.71
CDY42167	Canola	extracellular	21.09	47.64
VIT_12s0055g01120.t01	Wine grape	cytosol	8.14	29.1
TraesCS5D01G430200.1	Wheat	peroxisome, plastid	21.92	25.61

Protein Annotations

EnsemblPlants:TraesCS5D01G071300.1	EnsemblPlantsGene:TraesCS5D01G071300	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188
PANTHER:PTHR16128	PANTHER:PTHR16128:SF8	PFAM:PF13450	SEG:seg	SUPFAM:SSF51905	MapMan:35.2

Description

No Description!

Coordinates

chr5D:+:69326556..69328920

Molecular Weight (calculated)

51741.8 Da

IEP (calculated)

8.575

GRAVY (calculated)

-0.216

Length

479 amino acids

Sequence
(BLAST)

001: MPLFHPAPCA RPAAARAASR FSGAVVAASG AGGARPPKAP PRRPRGKPRF SRQSAIKKSF QQEQVVFSTP VPADPTVAII GGGASGLACA SALAARGVRA
101: VVFDTGMHGL GGRMATRMVD DGRRLVFDHA AQFFTASDQR FQKLVDEWVD KGLAREWRGS IGELEAGGHF TAIPSSTPRY IGVRGMRPLA DAMLPEVYQN
201: DLIKVVRPSW ISKLEPFNGL WRLFESEKPQ GQYDAVVIAH NGKCANRLLS TSGLPQLTRQ MKRLELSSIW ALLAAFDDPL PIPQDNTYGT FEGAFVRDID
301: SLSWMANNTQ KLFPLETNRP ECWTFFSTAS YGKKNKVPQE NIPNATAEKV KRDMLGGVEL ALGLSTGSLQ RPFYTRVQLW GAALPMNTPG VPCIFDPQGR
401: AGICGDWLTG SSIEAAVLSG MSLGDHVADY FASGGERPEE FAIGLDDSLN LVEGHDIGQF PGLDPQKPQV AEPQLAPSI

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.