Factsheet for PGSC0003DMT400070768

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g097160.2.1	Tomato	plastid	97.99	87.6
KRH68746	Soybean	cytosol, peroxisome, plastid	19.02	72.65
VIT_14s0081g00490.t01	Wine grape	plastid	72.71	69.59
KRG96985	Soybean	mitochondrion	52.35	67.44
AT3G04650.1	Thale cress	plastid	65.32	60.08
Bra001116.1-P	Field mustard	plastid	65.1	59.63
CDX74176	Canola	plastid	65.1	59.63
GSMUA_Achr8P03160_001	Banana	plastid	65.1	59.39
CDY40666	Canola	plastid	64.65	59.22
EES16280	Sorghum	plastid	61.3	57.93
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	61.3	57.56
TraesCS5D01G071300.1	Wheat	plastid	61.3	57.2
TraesCS5A01G059800.2	Wheat	plastid	60.85	56.78
Os12t0597400-01	Rice	plastid	62.42	56.14
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	61.3	54.69
Zm00001d030962_P001	Maize	plastid	61.74	54.65
CDY42167	Canola	extracellular	24.38	51.42
VIT_12s0055g01120.t01	Wine grape	cytosol	11.63	38.81
PGSC0003DMT400029217	Potato	plastid	22.15	26.83

Protein Annotations

EnsemblPlants:PGSC0003DMT400070768	EnsemblPlantsGene:PGSC0003DMG400027514	Gene3D:3.50.50.60	Gene3D:3.90.660.10	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188
PANTHER:PTHR16128	PANTHER:PTHR16128:SF8	PFAM:PF13450	PGSC:PGSC0003DMG400027514	SEG:seg	SUPFAM:SSF51905
UniParc:UPI000296BA38	UniProt:M1CMN2	MapMan:35.2	:	:	:

Description

Oxidoreductase [Source:PGSC_GENE;Acc:PGSC0003DMG400027514]

Coordinates

chr1:+:74903124..74911002

Molecular Weight (calculated)

48573.3 Da

IEP (calculated)

8.008

GRAVY (calculated)

-0.173

Length

447 amino acids

Sequence
(BLAST)

001: MESRNPTQRR STSPRKFKPR YGTSRRSTIK KSLSQEQVNF TKPIPDDPVV GIIGGGMSGL TCALYLEKRG IRSTVFDTGI HGLGGRMGTR MIDHQPLIFD
101: HAAQFFTVTN PKFAELVDDW LKRDLVREWK GTIGELEVGG HFVPFPSSPP KYIGVNGMRP LADSLLSQTS LVNVVRPCWV SALEPFNGTW HLSEKQKPCG
201: QFDAIVIAHN GKCANRLLAA SGLPLIAKQM KRLELSSIWA LLAAFEDPLP TALNAASLPF EGTFVKGVES VSWMANNTKK LLASDSGPQC WTFFSTATFG
301: KQNKVPQESI PNATAEKVKE AMLEGVEKAL GLSKSSLQKP FYTKLQLWGA ALPTNTPGIP CIFDPRGRAG ICGDWLLGSS LEAAALSGIA LADQIADYFE
401: QGGPCSDEFA VGLHDEYKPL EGHDIGQFPG LESVDQITNV PALTLAT

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.