Factsheet for Solyc01g097160.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070768	Potato	plastid	87.6	97.99
KRH68746	Soybean	cytosol, peroxisome, plastid	17.0	72.65
VIT_14s0081g00490.t01	Wine grape	plastid	65.6	70.24
KRG96985	Soybean	mitochondrion	46.8	67.44
AT3G04650.1	Thale cress	plastid	59.2	60.91
CDX74176	Canola	plastid	59.4	60.86
Bra001116.1-P	Field mustard	plastid	59.2	60.66
CDY40666	Canola	plastid	59.0	60.45
GSMUA_Achr8P03160_001	Banana	plastid	58.4	59.59
EES16280	Sorghum	plastid	55.2	58.35
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	55.4	58.19
TraesCS5D01G071300.1	Wheat	plastid	55.4	57.83
TraesCS5A01G059800.2	Wheat	plastid	55.0	57.41
Os12t0597400-01	Rice	plastid	56.6	56.94
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	55.4	55.29
Zm00001d030962_P001	Maize	plastid	55.4	54.85
CDY42167	Canola	extracellular	22.6	53.3
VIT_12s0055g01120.t01	Wine grape	cytosol	11.0	41.04
Solyc10g005620.2.1	Tomato	plastid	19.6	26.56

Protein Annotations

EnsemblPlants:Solyc01g097160.2.1	EnsemblPlantsGene:Solyc01g097160.2	Gene3D:3.50.50.60	Gene3D:3.90.660.10	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188
PANTHER:PTHR16128	PANTHER:PTHR16128:SF8	PFAM:PF13450	SEG:seg	SUPFAM:SSF51905	UniParc:UPI0002767E42
UniProt:K4B0A4	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1:+:88107450..88114175

Molecular Weight (calculated)

54090.2 Da

IEP (calculated)

8.824

GRAVY (calculated)

-0.132

Length

500 amino acids

Sequence
(BLAST)

001: MNSACNNPLL SSSFLHQPLK SSRFPNVSIF FPIISNPITP NRCIPIKTTI KGSMESRNPT KGRSTSPRKF KPRYGTSRRS TIKKSLSQEQ VNFTKPIPDD
101: PVVGIIGGGM SGLTCALYLE KRGIRSTVFD TGIHGLGGRM GTRMIDHQPL IFDHAAQFFT VTNPKFAELV DDWLKRGLVR EWKGTIGELE VGGNFVPFPS
201: SPPKYIGVNG MRPLADSLLS QTSLVNVVRP CWVSALEPFN GTWHLSEKGK PCGQFDAIVI AHNGKCANRL LAASGLPLIA KQMKRLELSS IWALLAAFED
301: PLPTALNAAS LPFEGAFVKG VESVSWMANN TKKLLASDSG PQCWTFFSTA TFGKQNKVPQ ESIPNATGEK VKEAMLEGVE KALGLSKSSL QKPFYTKLQL
401: WGAALPTNTP GIPCIFDPRG RAGICGDWLL GSSLEAAALS GIALADQIAD YFEQGGPCSD EFAVGLHDEY KPLEGHDIGQ FPGLDTVDQI TNVPALTLAT

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.