CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74176	Canola	plastid	96.72	96.72
AT3G04650.1	Thale cress	plastid	90.98	91.36
KRH68746	Soybean	cytosol, peroxisome, plastid	16.6	69.23
CDY42167	Canola	extracellular	29.51	67.92
VIT_14s0081g00490.t01	Wine grape	plastid	63.73	66.6
KRG96985	Soybean	mitochondrion	46.93	65.99
PGSC0003DMT400070768	Potato	plastid	59.22	64.65
Solyc01g097160.2.1	Tomato	plastid	60.45	59.0
GSMUA_Achr8P03160_001	Banana	plastid	58.4	58.16
EES16280	Sorghum	plastid	56.35	58.14
Os12t0597400-01	Rice	plastid	57.17	56.14
TraesCS5B01G067100.1	Wheat	mitochondrion, plastid	54.71	56.09
TraesCS5A01G059800.2	Wheat	plastid	54.71	55.74
TraesCS5D01G071300.1	Wheat	plastid	54.71	55.74
Zm00001d030962_P001	Maize	plastid	56.97	55.05
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	55.12	53.69
VIT_12s0055g01120.t01	Wine grape	cytosol	9.43	34.33
CDY08271	Canola	mitochondrion, plastid	20.9	26.42
CDY26077	Canola	mitochondrion, plastid	20.7	26.17

Protein Annotations

EnsemblPlants:CDY40666	EnsemblPlantsGene:GSBRNA2T00071544001	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:A0A078HSH2	InterPro:FAD/NAD-bd_sf
InterPro:IPR036188	PANTHER:PTHR16128	PANTHER:PTHR16128:SF8	PFAM:PF13450	ProteinID:CDY40666	ProteinID:CDY40666.1
SEG:seg	SUPFAM:SSF51905	UniParc:UPI0004EDE5A4	UniProt:A0A078HSH2	MapMan:35.2	:

Description

BnaC03g33820DBnaC03g33820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSH2]

Coordinates

chrLK032477:+:46637..49116

Molecular Weight (calculated)

52647.0 Da

IEP (calculated)

9.012

GRAVY (calculated)

-0.213

Length

488 amino acids

Sequence
(BLAST)

001: MATSLIPLSS SFLQPLKFKT LAKPRTPLNL STNRKITTTC DSQNKNTGAS SNPSSRNPNF QKRRKSSKYG TSRRSILKKS FLQEQVTFTA RVSEDPQVAI
101: IGGGMAGLVC ALNLEARGVK STVFDTGIHG LGGRLGTRFV EPQGLVFDHA AQFLTADDSR FIQYVDGWLE KGLVREWKGA VGDLEVGGSF SQFPPSSPPR
201: YIAVNGMRSL ADSLLLESRL ANVVRPCWIS KLEPLNGMWH LSENGTPRGQ FDVIVIAHNG KCANRLLSSS GLPLVAKQMK KLDLSSIWAL LAAFDDPLPT
301: VNFEGAFVKG VESLSWMGNN SAKLGNGGTP HCWTFFSTAT YGKQNKVPQE NIPTVTSEKV RAGMLQGVEI ALGLPEGSLP KPVYTRLQLW GAALPKNTPA
401: VPCIFDPQGR AGICGDWLLG SNLESAALSG EALGNHIADY LQNSEANPEE FAIGLHDRPS PLAGHDIGQF PGLTSVGEKQ EAEAYQLL

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.