Factsheet for TraesCS5B01G067100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G059800.2	Wheat	plastid	98.53	97.91
TraesCS5D01G071300.1	Wheat	plastid	98.11	97.49
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	94.96	90.22
EES16280	Sorghum	plastid	77.94	78.44
Os12t0597400-01	Rice	plastid	79.62	76.26
Zm00001d030962_P001	Maize	plastid	77.52	73.07
KRH68746	Soybean	cytosol, peroxisome, plastid	16.18	65.81
GSMUA_Achr8P03160_001	Banana	plastid	63.87	62.04
PGSC0003DMT400070768	Potato	plastid	57.56	61.3
VIT_14s0081g00490.t01	Wine grape	plastid	59.66	60.81
KRG96985	Soybean	mitochondrion	43.91	60.23
Solyc01g097160.2.1	Tomato	plastid	58.19	55.4
CDX74176	Canola	plastid	56.72	55.33
Bra001116.1-P	Field mustard	plastid	56.72	55.33
AT3G04650.1	Thale cress	plastid	55.88	54.73
CDY40666	Canola	plastid	56.09	54.71
CDY42167	Canola	extracellular	21.43	48.11
VIT_12s0055g01120.t01	Wine grape	cytosol	8.19	29.1
TraesCS5B01G423800.1	Wheat	plastid	21.01	26.6

Protein Annotations

EnsemblPlants:TraesCS5B01G067100.1	EnsemblPlantsGene:TraesCS5B01G067100	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188
PANTHER:PTHR16128	PANTHER:PTHR16128:SF8	PFAM:PF13450	SEG:seg	SUPFAM:SSF51905	MapMan:35.2

Description

No Description!

Coordinates

chr5B:+:75206558..75210589

Molecular Weight (calculated)

51438.4 Da

IEP (calculated)

8.583

GRAVY (calculated)

-0.235

Length

476 amino acids

Sequence
(BLAST)

001: MPLFHLAPCA RPAAGRAASR FSGAVVAASG AGGARPPKAP PRRPRGKPRF SRQSAIKKSF QQEQVVFSTP VPADPTVAII GGGASGLACA SALAARGVRA
101: VVFDTGMHGL GGRMATRMVD DGRRLVFDHA AQFFTASDQR FQELVDEWVE KGLAREWRGS IGELEAGGHF TAIPSSTPRY IGVRGMRPLA DAMLPENDLI
201: KVVRPSWISK LEPFNGLWRL FENEKPQGQY DAVVIAHNGK CANRLLSTSG LPQLTRQMKR LELSSVWALL AAFDDPLPIP QDNSYGTFEG AFVRDIDSLS
301: WMANNTRKLF PLETNRPECW TFFSTASYGK KNKVPQENIP NATAEKVKRD MLGGVELALG LSTGSLQRPF YTRVQLWGAA LPMNTPGVPC IFDPQGRAGI
401: CGDWLTGSSI EAAVLSGMSL GDHVADYFAS GGERPEEFAI GLDDSLNRVE GHDIGQFPGL DPQKPQVAEP QLAPSI

Best Arabidopsis Sequence Match ( AT3G04650.1 )
(BLAST)

001: MATSLMSLSS SFLQPLKLKT LAQPRNTDLS TTRKIITTCD SQNNTGKSNP SSRNPNFQKR RNSSKYGTSR RSILKKSFLQ EQVTFTARVS DDPHVAIIGG
101: GMAGLVCALN LEARGVQSTV FDTGIHGLGG RLGTRIIEPQ GLIFDHAAQF FTADDSRFIK LVDGWLEKGL VREWKGAVGE LEIGGSFSQF PSSSPPRYIA
201: ANGMRSLADS LLLESQMVNL VRPCWISKLE PLNGMWHLSE NGTPRGQFDV IVIAHNGKCA NRLLSASGLP LVAKQMKKLD LSSIWALLAA FDDPLPTVNF
301: EGAFVKGVES LSWMGNNSAK LGNGRTPPHC WTFFSTAAYG KQNKVPQENI PTVTAEKVKA GMLQGVEIAL GLPEGSLPKP VYTRLQLWGA ALPKNTPAVP
401: CIFDPQGRAG ICGDWLLGSN LESAAISGAA LGNHIAEFLQ NGEANPEEFA IGLHDRLSPL AGHDIGQFPG LTSVGEKEEA NAYQLL

Arabidopsis Description

AT3g04650/F7O18_13 [Source:UniProtKB/TrEMBL;Acc:Q9SR09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.