Factsheet for HORVU5Hr1G103040.10

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G421900.3	Wheat	cytosol, peroxisome, plastid	70.09	94.75
TraesCS5B01G423800.1	Wheat	plastid	79.68	92.82
TraesCS5D01G430200.1	Wheat	peroxisome, plastid	79.68	85.12
Os03t0784000-03	Rice	plastid	69.41	79.58
KXG37426	Sorghum	plastid	65.53	75.93
Zm00001d034338_P001	Maize	plastid	65.3	75.86
GSMUA_Achr7P07990_001	Banana	plastid	54.11	63.54
VIT_19s0027g00380.t01	Wine grape	plastid	47.95	56.91
HORVU5Hr1G103050.2	Barley	cytosol, plastid	21.0	55.76
KRH43821	Soybean	plastid	46.8	55.56
Solyc10g005620.2.1	Tomato	plastid	45.89	54.47
PGSC0003DMT400029217	Potato	plastid	45.66	54.2
AT1G56000.1	Thale cress	plastid	45.89	52.34
CDY08271	Canola	mitochondrion, plastid	44.75	50.78
CDY26077	Canola	mitochondrion, plastid	44.52	50.52
Bra037093.1-P	Field mustard	mitochondrion, plastid	44.52	50.52
AT1G55980.1	Thale cress	mitochondrion	38.81	36.32
HORVU5Hr1G015050.6	Barley	mitochondrion, plastid	21.69	18.96

Protein Annotations

EnsemblPlants:HORVU5Hr1G103040.10	EnsemblPlantsGene:HORVU5Hr1G103040	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:IPR036188	PANTHER:PTHR16128	PANTHER:PTHR16128:SF5	PFAM:PF01593	SEG:seg	SUPFAM:SSF51971
UniParc:UPI000B46A81F	UniProt:A0A287SIK5	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:614776838..614780438

Molecular Weight (calculated)

45243.5 Da

IEP (calculated)

9.057

GRAVY (calculated)

-0.098

Length

438 amino acids

Sequence
(BLAST)

001: PRRTPPIPQP RQGRAAEKNP TMSAAAANVA VIGAGMTGAV CASLLAARGV AVTLXXXXXX XXXXXXXXXX XXRPRPRRTH GAAEVLDRFT APSCRCSALT
101: GVPFRRGGGA RREVMDDGTG LRFDHGAPYF TVSNDEVARV VGGWEARGLV AEWKAMFACF DRETGKFRDF DKEGTMKKYV GVPGMNSICK SLCQEDGVVG
201: KFGITIGKMD WLQDRSSWSL ASLDGTDLGS FDFVVATDKN IASRKVSGLT GKPPPLDLSV FPHLSVMIQD IPVRPCFALM LAFSEPLSMV PVQGFSFYNS
301: YYLSWAFCDS SKPGRHVPPN SQSWVLRSTT EYASKVIDSM GPRKPSADAL AKVAEELFRE FQTTGLNIPQ PVFMKAHRWG GAFPAISIGG DDKCVWEKNM
401: KLAICGDFCA SPTVEGAVLS GMRGASKILG CLNLPSGL

Best Arabidopsis Sequence Match ( AT1G56000.1 )
(BLAST)

001: MAATTISPAI RKQMSSVAVA MKVAVIGSGI SGAVCASTLA RNGVSVTIFD SGRGPGGRMS QRREIGEDGK ELMFDHGAPF FCVSNSDAMA LVHEWESRGF
101: VSEWKQVFGS FDCASNKFLG IQQEGDAKKY VGVPGMNSIS KALCNESGVK SMFGTGIAKM EWLEEEIPWL LTDSKGENLG RFDGVVASDK NIVSPRFTQV
201: TGLPPPLDLS LVPELATKLQ NIPVLPCFSL MLAFKEPLSS IPVKGLSFKN SEILSWAHCE STKPGRSTDS ERWILHSTPD YANSVIAKTG LQKLSSETLN
301: KISEEMFKEF QCSGLVSSLP FFMKAHRWGS AFPAKSIAVE ERCLWDRNRN LAICGDFCVS PNVEGAILSG LAAASKLLQT SSCL

Arabidopsis Description

AT1G56000 protein [Source:UniProtKB/TrEMBL;Acc:Q8VYV2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.