Factsheet for TraesCS5A01G421900.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G423800.1	Wheat	plastid	97.53	84.04
TraesCS5D01G430200.1	Wheat	peroxisome, plastid	97.53	77.07
Os03t0784000-03	Rice	plastid	84.26	71.47
HORVU5Hr1G103040.10	Barley	mitochondrion, peroxisome	94.75	70.09
KXG37426	Sorghum	plastid	79.94	68.52
Zm00001d034338_P001	Maize	plastid	79.63	68.44
GSMUA_Achr7P07990_001	Banana	plastid	63.89	55.5
VIT_19s0027g00380.t01	Wine grape	plastid	57.72	50.68
KRH43821	Soybean	plastid	55.25	48.51
PGSC0003DMT400029217	Potato	plastid	54.32	47.7
Solyc10g005620.2.1	Tomato	plastid	54.01	47.43
AT1G56000.1	Thale cress	plastid	53.7	45.31
CDY08271	Canola	mitochondrion, plastid	52.47	44.04
CDY26077	Canola	mitochondrion, plastid	52.16	43.78
Bra037093.1-P	Field mustard	mitochondrion, plastid	52.16	43.78
HORVU5Hr1G103050.2	Barley	cytosol, plastid	17.28	33.94
AT1G55980.1	Thale cress	mitochondrion	43.83	30.34
TraesCS5A01G059800.2	Wheat	plastid	23.77	16.08

Protein Annotations

EnsemblPlants:TraesCS5A01G421900.3	EnsemblPlantsGene:TraesCS5A01G421900	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:IPR036188	PANTHER:PTHR16128	PANTHER:PTHR16128:SF5	PFAM:PF01593	SUPFAM:SSF51905	MapMan:35.2

Description

No Description!

Coordinates

chr5A:+:608337776..608339966

Molecular Weight (calculated)

35131.2 Da

IEP (calculated)

6.501

GRAVY (calculated)

-0.066

Length

324 amino acids

Sequence
(BLAST)

001: MDDGTELRFD HGAPCFTVSN DEVARVVGGW EARGLVAEWK AMFACFDRET GKFRDFDKEG TMKKYVGVPG MNSICKSLCQ EDGVVSKFGV TIGKMDWLQH
101: RSSWSLASLD GKDLGSFDFV VATDKNIASQ KVSGLTGKPP PLDLSVFPHL SAMIQDIPVR PCFALMLAFS EPLAMVPVQG FSFHNFDSLS WAFCDSSKPG
201: PHVPPNSQSW VLRSTTEYAS KVIDSMGPRK PSADALAKVA EELFREFQGT GLNIPQPIFM KAHRWGGAFP AISIGGDDKC VWEKNMKLAI CGDFCASPSV
301: EGAVLSGMRG ASKILGCLNL PSGL

Best Arabidopsis Sequence Match ( AT1G56000.1 )
(BLAST)

001: MAATTISPAI RKQMSSVAVA MKVAVIGSGI SGAVCASTLA RNGVSVTIFD SGRGPGGRMS QRREIGEDGK ELMFDHGAPF FCVSNSDAMA LVHEWESRGF
101: VSEWKQVFGS FDCASNKFLG IQQEGDAKKY VGVPGMNSIS KALCNESGVK SMFGTGIAKM EWLEEEIPWL LTDSKGENLG RFDGVVASDK NIVSPRFTQV
201: TGLPPPLDLS LVPELATKLQ NIPVLPCFSL MLAFKEPLSS IPVKGLSFKN SEILSWAHCE STKPGRSTDS ERWILHSTPD YANSVIAKTG LQKLSSETLN
301: KISEEMFKEF QCSGLVSSLP FFMKAHRWGS AFPAKSIAVE ERCLWDRNRN LAICGDFCVS PNVEGAILSG LAAASKLLQT SSCL

Arabidopsis Description

AT1G56000 protein [Source:UniProtKB/TrEMBL;Acc:Q8VYV2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.