Factsheet for Bra037093.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08271	Canola	mitochondrion, plastid	98.96	98.96
AT1G56000.1	Thale cress	plastid	88.34	88.8
VIT_19s0027g00380.t01	Wine grape	plastid	62.69	65.58
KRH43821	Soybean	plastid	62.18	65.04
AT1G55980.1	Thale cress	mitochondrion	74.35	61.32
Solyc10g005620.2.1	Tomato	plastid	58.29	60.98
PGSC0003DMT400029217	Potato	plastid	58.03	60.7
GSMUA_Achr7P07990_001	Banana	plastid	58.03	60.05
Os03t0784000-03	Rice	plastid	54.92	55.5
Zm00001d034338_P001	Maize	plastid	53.11	54.38
TraesCS5B01G423800.1	Wheat	plastid	52.59	53.99
KXG37426	Sorghum	plastid	52.07	53.17
TraesCS5A01G421900.3	Wheat	cytosol, peroxisome, plastid	43.78	52.16
TraesCS5D01G430200.1	Wheat	peroxisome, plastid	53.11	50.0
HORVU5Hr1G103040.10	Barley	mitochondrion, peroxisome	50.52	44.52
HORVU5Hr1G103050.2	Barley	cytosol, plastid	11.4	26.67
Bra001116.1-P	Field mustard	plastid	26.94	21.31

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:35.2	InterPro:Amino_oxidase	EnsemblPlantsGene:Bra037093	EnsemblPlants:Bra037093.1
EnsemblPlants:Bra037093.1-P	InterPro:FAD/NAD-bd_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188	UniProt:M4F7N2	PFAM:PF01593	PFAM:PF13450
PRINTS:PR00419	PANTHER:PTHR16128	PANTHER:PTHR16128:SF5	SUPFAM:SSF51905	UniParc:UPI00025475E4	SEG:seg

Description

AT1G56000 (E=2e-180) | amine oxidase-related

Coordinates

chrA05:-:10017060..10018928

Molecular Weight (calculated)

41613.8 Da

IEP (calculated)

7.319

GRAVY (calculated)

-0.029

Length

386 amino acids

Sequence
(BLAST)

001: MSGSILISPA IRRRSVSVAM KVAVIGSGIS GAVCASALAR NGVSVTIFDS GRGPGGRTSQ RREVGEDGKE LTFDHGAPFF SVTNSDAMAL VHEWESRGFV
101: SQWKQVFGSF DCASNKFLGI IQQEEDANNN KYVGVPGMNS IAKALCNQSG VESMFGTGIA KLEWLEEEIP WLLTDSKGQN LGRFDGVVAS DKNIASPRFT
201: QLTGLSPPLD LNLVPELATK LQDIPVFPCF SLMLAFKEPL SLIPAKGLSF KNSEILSWAH CDSTKPGRST DSERWILHST PGYASSVIAK TGLQKLSSET
301: LDKISEEMFK EFQCSGLVSS LPFFMKAHRW GSAFPAKSIA VEERCLWDRN RNLAICGDFC VSPNVQGAIL SGLAAASKLL QASSCL

Best Arabidopsis Sequence Match ( AT1G56000.1 )
(BLAST)

001: MAATTISPAI RKQMSSVAVA MKVAVIGSGI SGAVCASTLA RNGVSVTIFD SGRGPGGRMS QRREIGEDGK ELMFDHGAPF FCVSNSDAMA LVHEWESRGF
101: VSEWKQVFGS FDCASNKFLG IQQEGDAKKY VGVPGMNSIS KALCNESGVK SMFGTGIAKM EWLEEEIPWL LTDSKGENLG RFDGVVASDK NIVSPRFTQV
201: TGLPPPLDLS LVPELATKLQ NIPVLPCFSL MLAFKEPLSS IPVKGLSFKN SEILSWAHCE STKPGRSTDS ERWILHSTPD YANSVIAKTG LQKLSSETLN
301: KISEEMFKEF QCSGLVSSLP FFMKAHRWGS AFPAKSIAVE ERCLWDRNRN LAICGDFCVS PNVEGAILSG LAAASKLLQT SSCL

Arabidopsis Description

AT1G56000 protein [Source:UniProtKB/TrEMBL;Acc:Q8VYV2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.