Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 6
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G56000.1 | Thale cress | plastid | 70.09 | 85.42 |
| CDY08271 | Canola | mitochondrion, plastid | 62.18 | 75.39 |
| CDY26077 | Canola | mitochondrion, plastid | 61.97 | 75.13 |
| Bra037093.1-P | Field mustard | mitochondrion, plastid | 61.32 | 74.35 |
| VIT_19s0027g00380.t01 | Wine grape | plastid | 43.8 | 55.56 |
| KRH43821 | Soybean | plastid | 43.8 | 55.56 |
| Solyc10g005620.2.1 | Tomato | plastid | 41.67 | 52.85 |
| PGSC0003DMT400029217 | Potato | plastid | 41.45 | 52.57 |
| GSMUA_Achr7P07990_001 | Banana | plastid | 40.6 | 50.94 |
| Zm00001d034338_P001 | Maize | plastid | 39.1 | 48.54 |
| Os03t0784000-03 | Rice | plastid | 39.32 | 48.17 |
| TraesCS5B01G423800.1 | Wheat | plastid | 37.82 | 47.07 |
| KXG37426 | Sorghum | plastid | 37.61 | 46.56 |
| TraesCS5D01G430200.1 | Wheat | peroxisome, plastid | 38.89 | 44.39 |
| TraesCS5A01G421900.3 | Wheat | cytosol, peroxisome, plastid | 30.34 | 43.83 |
| HORVU5Hr1G103040.10 | Barley | mitochondrion, peroxisome | 36.32 | 38.81 |
| HORVU5Hr1G103050.2 | Barley | cytosol, plastid | 10.04 | 28.48 |
| AT3G04650.1 | Thale cress | plastid | 19.02 | 18.31 |
Protein Annotations
| Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | MapMan:35.1 | EntrezGene:842049 | ProteinID:AEE33327.2 | ProteinID:ANM59571.1 |
| ArrayExpress:AT1G55980 | EnsemblPlantsGene:AT1G55980 | RefSeq:AT1G55980 | TAIR:AT1G55980 | RefSeq:AT1G55980-TAIR-G | EnsemblPlants:AT1G55980.1 |
| TAIR:AT1G55980.1 | UniProt:F4I3I1 | InterPro:FAD/NAD-bd_sf | InterPro:IPR036188 | RefSeq:NP_001319248.1 | RefSeq:NP_175994.3 |
| ProteinID:OAP18723.1 | PFAM:PF13450 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0025281 | PRINTS:PR00419 |
| PANTHER:PTHR16128 | PANTHER:PTHR16128:SF5 | SUPFAM:SSF51905 | UniParc:UPI000848D7FC | SEG:seg | : |
Description
FAD/NAD(P)-binding oxidoreductase family protein [Source:TAIR;Acc:AT1G55980]
Coordinates
chr1:-:20938899..20941884
Molecular Weight (calculated)
51212.3 Da
IEP (calculated)
6.772
GRAVY (calculated)
-0.232
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MYSITLTRMT VLKKLLRKFD SPVTKKTSCA IDKYDFLRCF AKDTQRESKV LQHIVIDVEV PVNEEPSRCE LSGDGNSDLV DVISHGRIGI DSSTSSSLTE
101: NDEVSTGEAT NPASDPHEVE PENAFRCKLH KAKAQKECKP MAATTISPAI RKQMSSVAVA MKVAVIGSGI SGAVCASTLA RNGVSVTIFD SGRGPGGRMS
201: QRREIGEDGK ELMFDHGAPF FCVSNSDAMA LVHEWESRGF VSEWKQVFGS FDCASNKFLG IQQEGDAKKY VGVPGMNSIS KALCNESGVK SMFGTGIAKM
301: EWLEEEIPWL LTDSKGENLG RFDGVVASDK NIVSPRFTQV TGLPPPLDLS LVPELATKLQ NIPVLPCFSL MLAFKEPLSS IPVKGLSFKN SEILSWAHCE
401: STKPGRSTDS ERWILHSTPD YANSVIAKTG LQKLSSETLN KISEEMFKEF QCSGLVSSLP FFMKAHRW
101: NDEVSTGEAT NPASDPHEVE PENAFRCKLH KAKAQKECKP MAATTISPAI RKQMSSVAVA MKVAVIGSGI SGAVCASTLA RNGVSVTIFD SGRGPGGRMS
201: QRREIGEDGK ELMFDHGAPF FCVSNSDAMA LVHEWESRGF VSEWKQVFGS FDCASNKFLG IQQEGDAKKY VGVPGMNSIS KALCNESGVK SMFGTGIAKM
301: EWLEEEIPWL LTDSKGENLG RFDGVVASDK NIVSPRFTQV TGLPPPLDLS LVPELATKLQ NIPVLPCFSL MLAFKEPLSS IPVKGLSFKN SEILSWAHCE
401: STKPGRSTDS ERWILHSTPD YANSVIAKTG LQKLSSETLN KISEEMFKEF QCSGLVSSLP FFMKAHRW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.