Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75038 | Canola | nucleus | 97.06 | 90.0 |
| AT2G36420.1 | Thale cress | nucleus | 79.41 | 73.8 |
| Bra017237.1-P | Field mustard | nucleus | 73.77 | 72.88 |
| Bra023069.1-P | Field mustard | nucleus | 69.12 | 70.68 |
| Bra005776.1-P | Field mustard | nucleus | 40.93 | 33.74 |
| PGSC0003DMT400072630 | Potato | nucleus | 34.56 | 33.18 |
| Solyc10g083530.1.1 | Tomato | nucleus | 31.62 | 32.91 |
| Bra009519.1-P | Field mustard | nucleus | 39.22 | 31.62 |
| KRH67860 | Soybean | nucleus | 38.97 | 30.87 |
| KRG96149 | Soybean | nucleus | 38.24 | 30.12 |
| Solyc09g009220.2.1 | Tomato | nucleus | 32.35 | 27.39 |
| PGSC0003DMT400006901 | Potato | nucleus | 32.6 | 27.2 |
| VIT_08s0007g03780.t01 | Wine grape | nucleus | 35.29 | 27.17 |
| KRH20039 | Soybean | nucleus | 32.11 | 26.73 |
| KRH32670 | Soybean | nucleus | 30.15 | 24.75 |
Protein Annotations
Description
AT2G36420 (E=1e-114) | unknown protein
Coordinates
chrA05:-:4399072..4401644
Molecular Weight (calculated)
46423.6 Da
IEP (calculated)
4.634
GRAVY (calculated)
-1.026
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSTLRVKK RKSENATVLP PGFFSCERSC FFATYTNSPD PRKSPLFELR SPANKKSRDG RVFLQIPTRT AAILMEAAAR IQKQQVEKAD KTNNRARNRG
101: NAFGMFGSVL KRLTNRKAKP CLHSADGNAV LPERGSEPTS SSSRRERLVE VDDKCFCESP FHFVLHTTPS TSGNRTPHFT STATSPARRS TEDEGSDETE
201: SLEKVRGQGE EDKEEEDKEQ CSPVSVLDPL EEEEDDEDHH QREPDHINLP PCSFEVVQRA KRRLLKKLRR FEKLAGLDPV DLEGKMSEED EEEDEESEED
301: DNVRVYDSDE EYEDVDDDAM ARETGSAEEE RRKKNDERQK KWRMMNAWRV GMGAEEDVDV VVQKDMRGEA GEWTKHGGEV EEAVSDLELS IFFFLIDELS
401: HELVSSPP
101: NAFGMFGSVL KRLTNRKAKP CLHSADGNAV LPERGSEPTS SSSRRERLVE VDDKCFCESP FHFVLHTTPS TSGNRTPHFT STATSPARRS TEDEGSDETE
201: SLEKVRGQGE EDKEEEDKEQ CSPVSVLDPL EEEEDDEDHH QREPDHINLP PCSFEVVQRA KRRLLKKLRR FEKLAGLDPV DLEGKMSEED EEEDEESEED
301: DNVRVYDSDE EYEDVDDDAM ARETGSAEEE RRKKNDERQK KWRMMNAWRV GMGAEEDVDV VVQKDMRGEA GEWTKHGGEV EEAVSDLELS IFFFLIDELS
401: HELVSSPP
001: MAEKEKKKHL HEFLEDDQEP FHLNHYIGNL RSQMGCSDMR VKKRKSDNVA TFPPGLFSCE NSCFFAAHKS PDPRKSPLFE LRSPGKKKIR DGRVFLQIPA
101: RTAAILLDAA ARIQKQQSEK AKTNKARTRG NGFGMFGSVL KLLTYRITKP RLDNADGNAV SLERGSEPTS SSRRERIVEI SDKCFCESPF HFVLQTTPSS
201: SGHQTPHFTS TATSPARRST EDEDSDETES LEKVRGQEEE DKEEEDKEQC SPVSVLDPLE EEEEDEDHHQ HEPDPPNNLS CSFEIVQRAK RRLLKKLRRF
301: EKLAGLDPVE LEGKMSEEED EEEEEYEESE EDDNIRIYDS DEEYEDVDEA MARESRCAED EKRKKNDERQ KKWRMMNAWR VGLGAEEDVD AVVRKDLREE
401: AGEWTRHGGE VEEAVSDLEH SIFFVLIDEF SRELVSSFL
101: RTAAILLDAA ARIQKQQSEK AKTNKARTRG NGFGMFGSVL KLLTYRITKP RLDNADGNAV SLERGSEPTS SSRRERIVEI SDKCFCESPF HFVLQTTPSS
201: SGHQTPHFTS TATSPARRST EDEDSDETES LEKVRGQEEE DKEEEDKEQC SPVSVLDPLE EEEEDEDHHQ HEPDPPNNLS CSFEIVQRAK RRLLKKLRRF
301: EKLAGLDPVE LEGKMSEEED EEEEEYEESE EDDNIRIYDS DEEYEDVDEA MARESRCAED EKRKKNDERQ KKWRMMNAWR VGLGAEEDVD AVVRKDLREE
401: AGEWTRHGGE VEEAVSDLEH SIFFVLIDEF SRELVSSFL
Arabidopsis Description
Nucleolin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SJR3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.