Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43718 | Canola | mitochondrion, nucleus | 62.95 | 89.97 |
| Bra005267.1-P | Field mustard | nucleus | 72.88 | 73.77 |
| Bra023069.1-P | Field mustard | nucleus | 70.7 | 73.18 |
| AT2G36420.1 | Thale cress | nucleus | 74.09 | 69.7 |
| Solyc10g083530.1.1 | Tomato | nucleus | 33.41 | 35.2 |
| PGSC0003DMT400072630 | Potato | nucleus | 35.84 | 34.82 |
| Bra005776.1-P | Field mustard | nucleus | 40.44 | 33.74 |
| Bra009519.1-P | Field mustard | nucleus | 40.19 | 32.81 |
| KRH67860 | Soybean | nucleus | 40.19 | 32.23 |
| KRG96149 | Soybean | nucleus | 39.95 | 31.85 |
| VIT_08s0007g03780.t01 | Wine grape | nucleus | 37.77 | 29.43 |
| Solyc09g009220.2.1 | Tomato | nucleus | 34.14 | 29.25 |
| PGSC0003DMT400006901 | Potato | nucleus | 34.62 | 29.24 |
| KRH20039 | Soybean | nucleus | 33.41 | 28.16 |
| KRH32670 | Soybean | nucleus | 32.2 | 26.76 |
Protein Annotations
Description
AT2G36420 (E=2e-109) | unknown protein
Coordinates
chrA04:+:15841912..15844433
Molecular Weight (calculated)
47014.8 Da
IEP (calculated)
5.025
GRAVY (calculated)
-0.841
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEKKKKKH LHELLQDDQE PFHLNHYISD LRSQMGCSEL RVKKRKSENA AVLPHGFFSC ESSCFFATHA NKSPLFELRS PANKKVRDGL HIPARTAAIL
101: LEAAARIQKQ QNNKSKNRAR NRGNAFGLLG SVLKRLTNLN GKPPLDNADR NAVLSEPTCR SSSSRERLVE IGDKYFCESP IHFVLHTTPS TSGHRTSHFT
201: STATSPARRS TEDEDSDETE SLEKVRGQEE EEEQCSPVSV LDPLEEEEDD KDHHQQEPGH LNLPSCSFEV VQRAKRRLLK KLRRFEKLAG LEPADLEGKM
301: SEEEEVCEES EEDDNIRVYD WDEEYEDVNE AMARESGCMQ EERQEKWMML NAWRVGMGAD VYVDAVVQKD MRGEAGQWTK HGGEVEETVA DLELSIFLFL
401: IDEFSHELVS SQS
101: LEAAARIQKQ QNNKSKNRAR NRGNAFGLLG SVLKRLTNLN GKPPLDNADR NAVLSEPTCR SSSSRERLVE IGDKYFCESP IHFVLHTTPS TSGHRTSHFT
201: STATSPARRS TEDEDSDETE SLEKVRGQEE EEEQCSPVSV LDPLEEEEDD KDHHQQEPGH LNLPSCSFEV VQRAKRRLLK KLRRFEKLAG LEPADLEGKM
301: SEEEEVCEES EEDDNIRVYD WDEEYEDVNE AMARESGCMQ EERQEKWMML NAWRVGMGAD VYVDAVVQKD MRGEAGQWTK HGGEVEETVA DLELSIFLFL
401: IDEFSHELVS SQS
001: MAEKEKKKHL HEFLEDDQEP FHLNHYIGNL RSQMGCSDMR VKKRKSDNVA TFPPGLFSCE NSCFFAAHKS PDPRKSPLFE LRSPGKKKIR DGRVFLQIPA
101: RTAAILLDAA ARIQKQQSEK AKTNKARTRG NGFGMFGSVL KLLTYRITKP RLDNADGNAV SLERGSEPTS SSRRERIVEI SDKCFCESPF HFVLQTTPSS
201: SGHQTPHFTS TATSPARRST EDEDSDETES LEKVRGQEEE DKEEEDKEQC SPVSVLDPLE EEEEDEDHHQ HEPDPPNNLS CSFEIVQRAK RRLLKKLRRF
301: EKLAGLDPVE LEGKMSEEED EEEEEYEESE EDDNIRIYDS DEEYEDVDEA MARESRCAED EKRKKNDERQ KKWRMMNAWR VGLGAEEDVD AVVRKDLREE
401: AGEWTRHGGE VEEAVSDLEH SIFFVLIDEF SRELVSSFL
101: RTAAILLDAA ARIQKQQSEK AKTNKARTRG NGFGMFGSVL KLLTYRITKP RLDNADGNAV SLERGSEPTS SSRRERIVEI SDKCFCESPF HFVLQTTPSS
201: SGHQTPHFTS TATSPARRST EDEDSDETES LEKVRGQEEE DKEEEDKEQC SPVSVLDPLE EEEEDEDHHQ HEPDPPNNLS CSFEIVQRAK RRLLKKLRRF
301: EKLAGLDPVE LEGKMSEEED EEEEEYEESE EDDNIRIYDS DEEYEDVDEA MARESRCAED EKRKKNDERQ KKWRMMNAWR VGLGAEEDVD AVVRKDLREE
401: AGEWTRHGGE VEEAVSDLEH SIFFVLIDEF SRELVSSFL
Arabidopsis Description
Nucleolin-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SJR3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.