Factsheet for Bra025926.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
golgi 3
plasma membrane 6
endoplasmic reticulum 4
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26182	Canola	plasma membrane	99.66	99.66
AT1G18180.1	Thale cress	plasma membrane	88.36	84.59
Bra015977.1-P	Field mustard	plasma membrane	77.74	78.01
Bra008106.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	78.08	77.82
PGSC0003DMT400074062	Potato	plasma membrane	71.92	73.17
Solyc06g068970.2.1	Tomato	nucleus	71.23	72.47
VIT_17s0000g02520.t01	Wine grape	plasma membrane	75.68	71.99
KRH41812	Soybean	endoplasmic reticulum, plasma membrane, vacuole	69.18	69.42
Os03t0708400-01	Rice	plasma membrane	69.18	69.42
TraesCS4B01G043600.1	Wheat	extracellular, plasma membrane, vacuole	69.18	69.42
KXG37747	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	69.52	69.28
TraesCS4D01G041100.1	Wheat	extracellular, plasma membrane, vacuole	68.49	68.73
TraesCS4A01G270500.1	Wheat	extracellular, plasma membrane, vacuole	68.15	68.38
HORVU4Hr1G007090.1	Barley	extracellular, plasma membrane, vacuole	67.47	67.7
Zm00001d013456_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	67.12	67.35
Solyc03g118830.2.1	Tomato	plasma membrane	69.52	66.78
KRH60513	Soybean	plasma membrane	68.84	65.69
PGSC0003DMT400014451	Potato	plasma membrane	70.55	64.38
GSMUA_Achr7P11890_001	Banana	plasma membrane	70.55	63.98
PGSC0003DMT400014452	Potato	cytosol, golgi, plasma membrane	45.21	52.17
Bra004499.1-P	Field mustard	plasma membrane	23.29	20.99

Protein Annotations

Gene3D:1.20.120.1630	InterPro:3-oxo-5_a-steroid_4-DH_C	MapMan:35.2	EnsemblPlantsGene:Bra025926	EnsemblPlants:Bra025926.1	EnsemblPlants:Bra025926.1-P
InterPro:DUF1295	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005886	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016627	GO:GO:0055114	InterPro:IPR001104	UniProt:M4EAW7	PFAM:PF06966
PFscan:PS50244	PANTHER:PTHR32251	PANTHER:PTHR32251:SF15	TMHMM:TMhelix	UniParc:UPI000253F3D8	:

Description

AT1G18180 (E=7e-156) | oxidoreductase, acting on the CH-CH group of donors

Coordinates

chrA06:+:6968328..6970098

Molecular Weight (calculated)

33653.8 Da

IEP (calculated)

9.894

GRAVY (calculated)

0.455

Length

292 amino acids

Sequence
(BLAST)

001: MVKVIDSHYL TITAIVTVVY QLIFFVITAL FKFDQVTDFA GSTNFVILAV LTLVLKGTWH FRQVVLTSLV VVWGLRLGMF LLMRILKWGE DRRFDEMREN
101: MGKLVVFWTL QAVWVWTVSL PVTLVNASNG GRLFQPADVI GWAMFVAGFL VEAIADQQKL LFKNRQENKG RWCDVGLWKY SRHPNYFGEM LLWWGIYVAS
201: LPVLKGAEFL VIVGPIFLTL LLFFVSGIPL LEESADKKYG NLGAYRHYKK TTSPLILLPR GVYGYLPKWC KTVFLFEFPL YSKNLPQETT VW

Best Arabidopsis Sequence Match ( AT1G18180.1 )
(BLAST)

001: MVKVIDSHYL AITAIVTVGY QFIFFVITAL FKFDQVTDFA GSTNFVILAV LTLLLKGTWH YRQIVLTVLV VVWGLRLGLF LLMRILQWGE DRRFDDMREN
101: IGKLVVFWIF QAVWVWTVSL PVTFVNASNG GRLFQPADVI GWTMWVAGFL IEATADQQKL SFKKCPENKG KWCDVGVWKY SRHPNYFGEM LLWWGLYVAS
201: LPVLKGLEYL VIIGPVFLTL LLLFVSGIPL LEESADKKYG NLGAYRHYKK TTSPLILLPR GVYGYLPIWC KSVFLFEFPL YSRNLPQETT AWDRRNSKKS
301: QRSID

Arabidopsis Description

Protein of unknown function (DUF1295) [Source:TAIR;Acc:AT1G18180]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.