Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37747 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 95.19 | 94.54 |
| TraesCS4B01G043600.1 | Wheat | extracellular, plasma membrane, vacuole | 86.6 | 86.6 |
| TraesCS4D01G041100.1 | Wheat | extracellular, plasma membrane, vacuole | 86.25 | 86.25 |
| TraesCS4A01G270500.1 | Wheat | extracellular, plasma membrane, vacuole | 86.25 | 86.25 |
| Os03t0708400-01 | Rice | plasma membrane | 86.25 | 86.25 |
| HORVU4Hr1G007090.1 | Barley | extracellular, plasma membrane, vacuole | 85.57 | 85.57 |
| Solyc06g068970.2.1 | Tomato | nucleus | 75.94 | 77.0 |
| PGSC0003DMT400074062 | Potato | plasma membrane | 74.91 | 75.96 |
| VIT_17s0000g02520.t01 | Wine grape | plasma membrane | 78.01 | 73.94 |
| KRH41812 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 72.51 | 72.51 |
| GSMUA_Achr7P11890_001 | Banana | plasma membrane | 80.07 | 72.36 |
| CDX96490 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 59.45 | 71.19 |
| Bra015977.1-P | Field mustard | plasma membrane | 70.45 | 70.45 |
| Bra008106.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 70.79 | 70.31 |
| CDY47744 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.45 | 70.21 |
| CDX82058 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.45 | 69.97 |
| KRH60513 | Soybean | plasma membrane | 73.2 | 69.61 |
| CDX72998 | Canola | plasma membrane | 69.42 | 69.42 |
| Solyc03g118830.2.1 | Tomato | plasma membrane | 71.82 | 68.75 |
| Bra025926.1-P | Field mustard | plasma membrane | 67.35 | 67.12 |
| CDY26182 | Canola | plasma membrane | 67.01 | 66.78 |
| CDY19194 | Canola | plasma membrane | 67.01 | 66.78 |
| PGSC0003DMT400014451 | Potato | plasma membrane | 73.2 | 66.56 |
| AT1G18180.1 | Thale cress | plasma membrane | 69.42 | 66.23 |
| AT1G73650.3 | Thale cress | plasma membrane | 68.38 | 65.89 |
| PGSC0003DMT400014452 | Potato | cytosol, golgi, plasma membrane | 51.2 | 58.89 |
| Zm00001d024925_P001 | Maize | plasma membrane | 24.05 | 19.94 |
Protein Annotations
| Gene3D:1.20.120.1630 | EntrezGene:100304216 | InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:35.2 | ProteinID:AQK63566.1 | EMBL:BT060483 |
| UniProt:C0HDS7 | InterPro:DUF1295 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016627 | GO:GO:0016853 | GO:GO:0055114 | InterPro:IPR001104 | PFAM:PF06966 |
| PFscan:PS50244 | PANTHER:PTHR32251 | PANTHER:PTHR32251:SF15 | TMHMM:TMhelix | UniParc:UPI000194865D | EnsemblPlantsGene:Zm00001d013456 |
| EnsemblPlants:Zm00001d013456_P001 | EnsemblPlants:Zm00001d013456_T001 | SEG:seg | : | : | : |
Description
FKBP-type peptidyl-prolyl cis-trans isomerase 5 isoform 2
Coordinates
chr5:-:12056763..12061089
Molecular Weight (calculated)
32878.5 Da
IEP (calculated)
9.301
GRAVY (calculated)
0.495
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTVLDSHFL ALTAIVTVGY QLLFFIITAL LRFDKVTDFA GSTNFIIIAI LTLALKGAWH FRQIVLTVLV TIWGLRLGLF LLMRILQWGE DRRFDKMRDN
101: LGKLAVFWIF QAVWVWSVSL PVTVVNASDR NPSIEARDII GWIIWLVGIC VEATADQQKL VFKNSPSNRG KWCNAGLWKY SRHPNYFGEI FLWWGVFVAS
201: TPVISDAEWL VILGPIFLTL LLLFVSGIPL LESSADKRYG RLEEYRAYKN TTSPLIPLPP AVYGSLPAWF KVAFLLELPL YNPGPGGDPI S
101: LGKLAVFWIF QAVWVWSVSL PVTVVNASDR NPSIEARDII GWIIWLVGIC VEATADQQKL VFKNSPSNRG KWCNAGLWKY SRHPNYFGEI FLWWGVFVAS
201: TPVISDAEWL VILGPIFLTL LLLFVSGIPL LESSADKRYG RLEEYRAYKN TTSPLIPLPP AVYGSLPAWF KVAFLLELPL YNPGPGGDPI S
001: MVKVIDSHYL AITAIVTVGY QFIFFVITAL FKFDQVTDFA GSTNFVILAV LTLLLKGTWH YRQIVLTVLV VVWGLRLGLF LLMRILQWGE DRRFDDMREN
101: IGKLVVFWIF QAVWVWTVSL PVTFVNASNG GRLFQPADVI GWTMWVAGFL IEATADQQKL SFKKCPENKG KWCDVGVWKY SRHPNYFGEM LLWWGLYVAS
201: LPVLKGLEYL VIIGPVFLTL LLLFVSGIPL LEESADKKYG NLGAYRHYKK TTSPLILLPR GVYGYLPIWC KSVFLFEFPL YSRNLPQETT A
101: IGKLVVFWIF QAVWVWTVSL PVTFVNASNG GRLFQPADVI GWTMWVAGFL IEATADQQKL SFKKCPENKG KWCDVGVWKY SRHPNYFGEM LLWWGLYVAS
201: LPVLKGLEYL VIIGPVFLTL LLLFVSGIPL LEESADKKYG NLGAYRHYKK TTSPLILLPR GVYGYLPIWC KSVFLFEFPL YSRNLPQETT A
Arabidopsis Description
Protein of unknown function (DUF1295) [Source:TAIR;Acc:AT1G18180]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.