Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 6
- golgi 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG37747 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 73.91 | 81.23 |
| Zm00001d013456_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 72.36 | 80.07 |
| Os03t0708400-01 | Rice | plasma membrane | 71.43 | 79.04 |
| TraesCS4B01G043600.1 | Wheat | extracellular, plasma membrane, vacuole | 70.5 | 78.01 |
| VIT_17s0000g02520.t01 | Wine grape | plasma membrane | 73.91 | 77.52 |
| TraesCS4D01G041100.1 | Wheat | extracellular, plasma membrane, vacuole | 69.88 | 77.32 |
| TraesCS4A01G270500.1 | Wheat | extracellular, plasma membrane, vacuole | 69.88 | 77.32 |
| CDX96490 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 58.07 | 76.95 |
| Solyc06g068970.2.1 | Tomato | nucleus | 68.32 | 76.66 |
| PGSC0003DMT400074062 | Potato | plasma membrane | 68.01 | 76.31 |
| HORVU4Hr1G007090.1 | Barley | extracellular, plasma membrane, vacuole | 68.63 | 75.94 |
| KRH41812 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 67.7 | 74.91 |
| CDX72998 | Canola | plasma membrane | 67.7 | 74.91 |
| Bra015977.1-P | Field mustard | plasma membrane | 67.39 | 74.57 |
| Bra008106.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 67.08 | 73.72 |
| CDX82058 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 66.77 | 73.38 |
| CDY47744 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 66.46 | 73.29 |
| AT1G73650.3 | Thale cress | plasma membrane | 68.63 | 73.18 |
| KRH60513 | Soybean | plasma membrane | 67.7 | 71.24 |
| CDY19194 | Canola | plasma membrane | 64.6 | 71.23 |
| CDY26182 | Canola | plasma membrane | 64.29 | 70.89 |
| Bra025926.1-P | Field mustard | plasma membrane | 63.98 | 70.55 |
| Solyc03g118830.2.1 | Tomato | plasma membrane | 65.84 | 69.74 |
| AT1G18180.1 | Thale cress | plasma membrane | 65.53 | 69.18 |
| PGSC0003DMT400014451 | Potato | plasma membrane | 66.77 | 67.19 |
| PGSC0003DMT400014452 | Potato | cytosol, golgi, plasma membrane | 43.79 | 55.73 |
| GSMUA_Achr1P00860_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 23.29 | 20.95 |
Protein Annotations
| Gene3D:1.20.120.1630 | InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:35.2 | InterPro:DUF1295 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016627 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr7G11890_001 |
| EnsemblPlants:GSMUA_Achr7P11890_001 | EnsemblPlants:GSMUA_Achr7T11890_001 | InterPro:IPR001104 | UniProt:M0TGS7 | PFAM:PF06966 | PFscan:PS50244 |
| PANTHER:PTHR32251 | PANTHER:PTHR32251:SF15 | TMHMM:TMhelix | UniParc:UPI000295BFBF | SEG:seg | : |
Description
DUF1295 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G11890_001]
Coordinates
chr7:-:9484513..9493539
Molecular Weight (calculated)
36630.3 Da
IEP (calculated)
10.013
GRAVY (calculated)
0.462
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRYLPLSLS SLLLLPPRGD KYGLSFLLGG MGTVLDSHFL ALTAIVTVGY QFLFFVVTAL LKFDKVTDFA GSTNFVILAI LTLVVKGSWH FRQIVLTILV
101: ALWGLRLGVF LLMRILQWGE DRRFDEMRNN LGKLAVFWIF QAVWVWTVSL PLTIVNASDR NPSIKPQDVI GWIMWSIGIS IEATADQQKL LFKNSPANKG
201: KWCNAGLWKY SRHPNYFGEI FLWWGIFVAS TSVLEGAEWL VVFGPIFLTL LLLFVSGIPL LEESADKRFG SMAEYRIYKN ITSPLVPLPP AVYGRLPAWF
301: KVAFLFEFPL YSRSFPHEGR LN
101: ALWGLRLGVF LLMRILQWGE DRRFDEMRNN LGKLAVFWIF QAVWVWTVSL PLTIVNASDR NPSIKPQDVI GWIMWSIGIS IEATADQQKL LFKNSPANKG
201: KWCNAGLWKY SRHPNYFGEI FLWWGIFVAS TSVLEGAEWL VVFGPIFLTL LLLFVSGIPL LEESADKRFG SMAEYRIYKN ITSPLVPLPP AVYGRLPAWF
301: KVAFLFEFPL YSRSFPHEGR LN
001: MGTVLDSHFL ALTAIVTVIY QFIFFVITAL FKFDQVTDFA GSTNFVILAV LTLVLKASWH FRQIVLTLLV VVWGLRLGIF LLMRILQWGE DRRFDEQRGN
101: IVRLIIFWTL QAVWVWTVSL PLTLVNASDG GGSLKPADVI GWTMWVFGFL IEAAADQQKL SFKNSPENRG KWCDVGVWKY SRHPNYFGEM LLWWGIFVAA
201: SPVLEGAEYL VIFGPLFLTL LLLFVSGIPL LEASADKKHG NSGAYRSYKK TTSPLILFPR GVYGNLPGWF KTVFLFEFPF YSRNLPQEGR LQNSKEKEVK
301: DD
101: IVRLIIFWTL QAVWVWTVSL PLTLVNASDG GGSLKPADVI GWTMWVFGFL IEAAADQQKL SFKNSPENRG KWCDVGVWKY SRHPNYFGEM LLWWGIFVAA
201: SPVLEGAEYL VIFGPLFLTL LLLFVSGIPL LEASADKKHG NSGAYRSYKK TTSPLILFPR GVYGNLPGWF KTVFLFEFPF YSRNLPQEGR LQNSKEKEVK
301: DD
Arabidopsis Description
Protein of unknown function (DUF1295) [Source:TAIR;Acc:AT1G73650]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.