Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014451 | Potato | plasma membrane | 90.79 | 86.25 |
| Solyc06g068970.2.1 | Tomato | nucleus | 77.3 | 81.88 |
| VIT_17s0000g02520.t01 | Wine grape | plasma membrane | 74.67 | 73.94 |
| Os03t0708400-01 | Rice | plasma membrane | 70.39 | 73.54 |
| Bra015977.1-P | Field mustard | plasma membrane | 69.08 | 72.16 |
| KRH41812 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 69.08 | 72.16 |
| KXG37747 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 69.41 | 72.01 |
| Zm00001d013456_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 68.75 | 71.82 |
| AT1G73650.3 | Thale cress | plasma membrane | 71.05 | 71.52 |
| Bra008106.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 68.75 | 71.33 |
| CDX72998 | Canola | plasma membrane | 68.09 | 71.13 |
| CDX96490 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 56.58 | 70.78 |
| CDX82058 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 68.09 | 70.65 |
| CDY47744 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 67.43 | 70.21 |
| CDY19194 | Canola | plasma membrane | 67.43 | 70.21 |
| KRH60513 | Soybean | plasma membrane | 70.39 | 69.93 |
| CDY26182 | Canola | plasma membrane | 67.11 | 69.86 |
| Bra025926.1-P | Field mustard | plasma membrane | 66.78 | 69.52 |
| HORVU4Hr1G007090.1 | Barley | extracellular, plasma membrane, vacuole | 65.79 | 68.73 |
| AT1G18180.1 | Thale cress | plasma membrane | 68.75 | 68.52 |
| TraesCS4B01G043600.1 | Wheat | extracellular, plasma membrane, vacuole | 65.13 | 68.04 |
| PGSC0003DMT400014452 | Potato | cytosol, golgi, plasma membrane | 56.58 | 67.98 |
| TraesCS4A01G270500.1 | Wheat | extracellular, plasma membrane, vacuole | 64.8 | 67.7 |
| TraesCS4D01G041100.1 | Wheat | extracellular, plasma membrane, vacuole | 64.8 | 67.7 |
| GSMUA_Achr7P11890_001 | Banana | plasma membrane | 69.74 | 65.84 |
| Solyc02g063390.2.1 | Tomato | plasma membrane | 21.71 | 20.75 |
| Solyc01g005320.2.1 | Tomato | plasma membrane | 17.76 | 16.77 |
Protein Annotations
| Gene3D:1.20.120.1630 | InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:35.2 | InterPro:DUF1295 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016627 | GO:GO:0055114 | InterPro:IPR001104 |
| UniProt:K4BM32 | PFAM:PF06966 | PFscan:PS50244 | PANTHER:PTHR32251 | PANTHER:PTHR32251:SF15 | EnsemblPlantsGene:Solyc03g118830.2 |
| EnsemblPlants:Solyc03g118830.2.1 | TMHMM:TMhelix | UniParc:UPI00027661A8 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr3:-:67629795..67634676
Molecular Weight (calculated)
34893.8 Da
IEP (calculated)
9.712
GRAVY (calculated)
0.288
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCHFLGLTA IVTLGYQFTF FIITAIFRFD KVTDFAGGTN FIILAILTLV LKGSWHFRQV LLSLFVVIWG LRLGLFLLMR ILQWGEDRRF DDKRDNLGKL
101: AIFWILQAIW VWTVSLPVTV VNASDKQPSV QAQDIIGWVM WIIGILVEIT ADQQKLAFKN SPENRGKWCS DGLWKYSRHP NYFGEILLWW GIFLASTPVL
201: EGAEWLVVFG PVFITLLLLF VSGIPLLEAS GDKKFGNVGA YRSYKRKTSP LILLPPGVYG SLPQWFKTIL LFEFPFYSRN LPQEELSWNR QTQQGSSRTD
301: PKMS
101: AIFWILQAIW VWTVSLPVTV VNASDKQPSV QAQDIIGWVM WIIGILVEIT ADQQKLAFKN SPENRGKWCS DGLWKYSRHP NYFGEILLWW GIFLASTPVL
201: EGAEWLVVFG PVFITLLLLF VSGIPLLEAS GDKKFGNVGA YRSYKRKTSP LILLPPGVYG SLPQWFKTIL LFEFPFYSRN LPQEELSWNR QTQQGSSRTD
301: PKMS
001: MGTVLDSHFL ALTAIVTVIY QFIFFVITAL FKFDQVTDFA GSTNFVILAV LTLVLKASWH FRQIVLTLLV VVWGLRLGIF LLMRILQWGE DRRFDEQRGN
101: IVRLIIFWTL QAVWVWTVSL PLTLVNASDG GGSLKPADVI GWTMWVFGFL IEAAADQQKL SFKNSPENRG KWCDVGVWKY SRHPNYFGEM LLWWGIFVAA
201: SPVLEGAEYL VIFGPLFLTL LLLFVSGIPL LEASADKKHG NSGAYRSYKK TTSPLILFPR GVYGNLPGWF KTVFLFEFPF YSRNLPQEGR LQNSKEKEVK
301: DD
101: IVRLIIFWTL QAVWVWTVSL PLTLVNASDG GGSLKPADVI GWTMWVFGFL IEAAADQQKL SFKNSPENRG KWCDVGVWKY SRHPNYFGEM LLWWGIFVAA
201: SPVLEGAEYL VIFGPLFLTL LLLFVSGIPL LEASADKKHG NSGAYRSYKK TTSPLILFPR GVYGNLPGWF KTVFLFEFPF YSRNLPQEGR LQNSKEKEVK
301: DD
Arabidopsis Description
Protein of unknown function (DUF1295) [Source:TAIR;Acc:AT1G73650]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.