Factsheet for Bra008106.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47744	Canola	endoplasmic reticulum, plasma membrane, vacuole	98.29	98.63
Bra015977.1-P	Field mustard	plasma membrane	88.74	89.35
AT1G73650.3	Thale cress	plasma membrane	90.44	87.75
Bra025926.1-P	Field mustard	plasma membrane	77.82	78.08
VIT_17s0000g02520.t01	Wine grape	plasma membrane	79.52	75.9
PGSC0003DMT400074062	Potato	plasma membrane	72.01	73.52
Solyc06g068970.2.1	Tomato	nucleus	71.67	73.17
Os03t0708400-01	Rice	plasma membrane	72.01	72.51
KXG37747	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	72.01	72.01
TraesCS4B01G043600.1	Wheat	extracellular, plasma membrane, vacuole	71.33	71.82
HORVU4Hr1G007090.1	Barley	extracellular, plasma membrane, vacuole	70.99	71.48
KRH41812	Soybean	endoplasmic reticulum, plasma membrane, vacuole	70.65	71.13
TraesCS4D01G041100.1	Wheat	extracellular, plasma membrane, vacuole	70.65	71.13
Zm00001d013456_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	70.31	70.79
TraesCS4A01G270500.1	Wheat	extracellular, plasma membrane, vacuole	70.31	70.79
Solyc03g118830.2.1	Tomato	plasma membrane	71.33	68.75
KRH60513	Soybean	plasma membrane	70.65	67.65
GSMUA_Achr7P11890_001	Banana	plasma membrane	73.72	67.08
PGSC0003DMT400014451	Potato	plasma membrane	70.65	64.69
PGSC0003DMT400014452	Potato	cytosol, golgi, plasma membrane	46.08	53.36
Bra004499.1-P	Field mustard	plasma membrane	23.55	21.3

Protein Annotations

Gene3D:1.20.120.1630	InterPro:3-oxo-5_a-steroid_4-DH_C	MapMan:35.2	EnsemblPlantsGene:Bra008106	EnsemblPlants:Bra008106.1	EnsemblPlants:Bra008106.1-P
InterPro:DUF1295	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016627	GO:GO:0055114	InterPro:IPR001104	UniProt:M4CV60	PFAM:PF06966	PFscan:PS50244
PANTHER:PTHR32251	PANTHER:PTHR32251:SF15	TMHMM:TMhelix	UniParc:UPI00025455B4	:	:

Description

AT1G73650 (E=9e-159) | oxidoreductase, acting on the CH-CH group of donors

Coordinates

chrA02:-:13163481..13165236

Molecular Weight (calculated)

33028.7 Da

IEP (calculated)

8.994

GRAVY (calculated)

0.537

Length

293 amino acids

Sequence
(BLAST)

001: MGTVLDSHFL ALTAIVTVVY QFIFFVITAL FKIDQVTDFA GSTNFVILAL LTLILKSTWH FRQIVLTLLV VVWGLRLGIF LLMRILQWGE DRRFDEMRGN
101: LVKLIVFWTL QAVWVWTVSL PLTVVNAASD GGGSLKPADI IGWTMWVFGF LIEAAADQQK LSFKNSPENR GKWCDVGVWK YSRHPNYFGE ILLWWGIFVA
201: ASPVLEGAEY LVIFGPLFLT LLLIFVSGIP LLEASSDKKH GNSGAYRFYK KTTSPLIPLP RGVYGNLPGW CKAVFLLELP FYSRNLPEEA AVS

Best Arabidopsis Sequence Match ( AT1G73650.2 )
(BLAST)

001: MGTVLDSHFL ALTAIVTVIY QFIFFVITAL FKFDQVTDFA GSTNFVILAV LTLVLKASWH FRQIVLTLLV VVWGLRLGIF LLMRILQWGE DRRFDEQRGN
101: IVRLIIFWTL QAVWVWTVSL PLTLVNASDG GGSLKPADVI GWTMWVFGFL IEAAADQQKL SFKNSPENRG KWCDVGVWKY SRHPNYFGEM LLWWGIFVAA
201: SPVLEGAEYL VIFGPLFLTL LLLFVSGIPL LEASADKKHG NSGAYRSYKK TTSPLILFPR GVYGNLPGWF KTVFLFEFPF YSRNLPQEVA V

Arabidopsis Description

Protein of unknown function (DUF1295) [Source:TAIR;Acc:AT1G73650]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.