Factsheet for Bra015977.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96490	Canola	endoplasmic reticulum, plasma membrane, vacuole	80.07	95.88
Bra008106.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	89.35	88.74
AT1G73650.3	Thale cress	plasma membrane	89.35	86.09
Bra025926.1-P	Field mustard	plasma membrane	78.01	77.74
PGSC0003DMT400074062	Potato	plasma membrane	73.88	74.91
Solyc06g068970.2.1	Tomato	nucleus	73.54	74.56
VIT_17s0000g02520.t01	Wine grape	plasma membrane	77.66	73.62
Os03t0708400-01	Rice	plasma membrane	72.85	72.85
KXG37747	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	72.51	72.01
TraesCS4B01G043600.1	Wheat	extracellular, plasma membrane, vacuole	70.79	70.79
Zm00001d013456_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	70.45	70.45
TraesCS4D01G041100.1	Wheat	extracellular, plasma membrane, vacuole	70.45	70.45
KRH41812	Soybean	endoplasmic reticulum, plasma membrane, vacuole	70.45	70.45
TraesCS4A01G270500.1	Wheat	extracellular, plasma membrane, vacuole	70.1	70.1
HORVU4Hr1G007090.1	Barley	extracellular, plasma membrane, vacuole	70.1	70.1
Solyc03g118830.2.1	Tomato	plasma membrane	72.16	69.08
GSMUA_Achr7P11890_001	Banana	plasma membrane	74.57	67.39
KRH60513	Soybean	plasma membrane	70.1	66.67
PGSC0003DMT400014451	Potato	plasma membrane	71.13	64.69
PGSC0003DMT400014452	Potato	cytosol, golgi, plasma membrane	46.05	52.96
Bra004499.1-P	Field mustard	plasma membrane	25.09	22.53

Protein Annotations

Gene3D:1.20.120.1630	InterPro:3-oxo-5_a-steroid_4-DH_C	MapMan:35.2	EnsemblPlantsGene:Bra015977	EnsemblPlants:Bra015977.1	EnsemblPlants:Bra015977.1-P
InterPro:DUF1295	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016627	GO:GO:0055114	InterPro:IPR001104	UniProt:M4DHK0	PFAM:PF06966	PFscan:PS50244
PANTHER:PTHR32251	PANTHER:PTHR32251:SF15	TMHMM:TMhelix	UniParc:UPI0002541D41	SEG:seg	:

Description

AT1G73650 (E=4e-145) | oxidoreductase, acting on the CH-CH group of donors

Coordinates

chrA07:-:19974333..19976054

Molecular Weight (calculated)

32998.5 Da

IEP (calculated)

7.709

GRAVY (calculated)

0.493

Length

291 amino acids

Sequence
(BLAST)

001: MGTVLDSHFL ALTAIVTVVY QFIFFVITAL FKIDQVTDFA GSTNFVILAV LTLVLNATWH FRQVVLTLLV VVWGLRLGTF LLMRILQWGE DRRFDEMRQN
101: LVKLIIFWTF QAVWVWTVSL PLTVVNASDG GGSLKPADVI GWTMWGFGFL IEAAADQQKL SFKNAPENRG KWCDAGLWKY SRHPNYFGEM LLWWGIFVAA
201: SPVLEGAEYL VVMGPVFLTL LLLFVSGIPL LEASADKKHG HLGAYRFYKK TTSPLILLPR GVYGNLPGWF KEVFLFELPF YSRNLSDDAD I

Best Arabidopsis Sequence Match ( AT1G73650.2 )
(BLAST)

001: MGTVLDSHFL ALTAIVTVIY QFIFFVITAL FKFDQVTDFA GSTNFVILAV LTLVLKASWH FRQIVLTLLV VVWGLRLGIF LLMRILQWGE DRRFDEQRGN
101: IVRLIIFWTL QAVWVWTVSL PLTLVNASDG GGSLKPADVI GWTMWVFGFL IEAAADQQKL SFKNSPENRG KWCDVGVWKY SRHPNYFGEM LLWWGIFVAA
201: SPVLEGAEYL VIFGPLFLTL LLLFVSGIPL LEASADKKHG NSGAYRSYKK TTSPLILFPR GVYGNLPGWF KTVFLFEFPF YSRNLPQEVA V

Arabidopsis Description

Protein of unknown function (DUF1295) [Source:TAIR;Acc:AT1G73650]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.