Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015977.1-P | Field mustard | plasma membrane | 95.88 | 80.07 |
| CDX72998 | Canola | plasma membrane | 92.59 | 77.32 |
| CDY47744 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 87.24 | 72.6 |
| CDX82058 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 86.83 | 72.01 |
| AT1G73650.3 | Thale cress | plasma membrane | 88.48 | 71.19 |
| CDY19194 | Canola | plasma membrane | 78.19 | 65.07 |
| CDY26182 | Canola | plasma membrane | 76.95 | 64.04 |
| PGSC0003DMT400074062 | Potato | plasma membrane | 74.07 | 62.72 |
| Solyc06g068970.2.1 | Tomato | nucleus | 73.66 | 62.37 |
| VIT_17s0000g02520.t01 | Wine grape | plasma membrane | 78.6 | 62.22 |
| KXG37747 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 74.07 | 61.43 |
| Os03t0708400-01 | Rice | plasma membrane | 72.84 | 60.82 |
| TraesCS4B01G043600.1 | Wheat | extracellular, plasma membrane, vacuole | 72.02 | 60.14 |
| TraesCS4D01G041100.1 | Wheat | extracellular, plasma membrane, vacuole | 71.6 | 59.79 |
| HORVU4Hr1G007090.1 | Barley | extracellular, plasma membrane, vacuole | 71.19 | 59.45 |
| TraesCS4A01G270500.1 | Wheat | extracellular, plasma membrane, vacuole | 71.19 | 59.45 |
| Zm00001d013456_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 71.19 | 59.45 |
| GSMUA_Achr7P11890_001 | Banana | plasma membrane | 76.95 | 58.07 |
| KRH41812 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 69.14 | 57.73 |
| Solyc03g118830.2.1 | Tomato | plasma membrane | 70.78 | 56.58 |
| KRH60513 | Soybean | plasma membrane | 69.14 | 54.9 |
| PGSC0003DMT400014451 | Potato | plasma membrane | 70.78 | 53.75 |
| PGSC0003DMT400014452 | Potato | cytosol, golgi, plasma membrane | 53.91 | 51.78 |
| CDX80055 | Canola | plasma membrane | 24.69 | 18.52 |
Protein Annotations
| Gene3D:1.20.120.1630 | InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:35.2 | GO:A0A078E3H6 | EnsemblPlants:CDX96490 | ProteinID:CDX96490 |
| ProteinID:CDX96490.1 | InterPro:DUF1295 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016627 | EnsemblPlantsGene:GSBRNA2T00102666001 | InterPro:IPR001104 | PFAM:PF06966 | PFscan:PS50244 |
| PANTHER:PTHR32251 | PANTHER:PTHR32251:SF15 | TMHMM:TMhelix | UniParc:UPI0004EE40CE | SEG:seg | : |
Description
BnaA07g31010D
Coordinates
chrLK031894:-:1058488..1060046
Molecular Weight (calculated)
27437.0 Da
IEP (calculated)
5.673
GRAVY (calculated)
0.753
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTVLDSHFL ALTAIVTVVY QFIFFVITAL FKIDQVTDFA GSTNFVILAV LTLVLNATWH FRQVVLTLLV VVWGLRLGTF LLMRILQWGE DRRFDEMRQN
101: LVKLIIFWTF QAVWVWTVSL PLTVVNASDG GGSLKPADVI GWTMWGFGFL IEAAADQQKL SFKNAPENRG KWCDAGLWKY SRHPNYFGEM LLWWGIFVAA
201: SPVLEGAEYL VVMGPVFLTL LLLFVSGIPL LEVLSLSLLE TIL
101: LVKLIIFWTF QAVWVWTVSL PLTVVNASDG GGSLKPADVI GWTMWGFGFL IEAAADQQKL SFKNAPENRG KWCDAGLWKY SRHPNYFGEM LLWWGIFVAA
201: SPVLEGAEYL VVMGPVFLTL LLLFVSGIPL LEVLSLSLLE TIL
001: MVKVIDSHYL AITAIVTVGY QFIFFVITAL FKFDQVTDFA GSTNFVILAV LTLLLKGTWH YRQIVLTVLV VVWGLRLGLF LLMRILQWGE DRRFDDMREN
101: IGKLVVFWIF QAVWVWTVSL PVTFVNASNG GRLFQPADVI GWTMWVAGFL IEATADQQKL SFKKCPENKG KWCDVGVWKY SRHPNYFGEM LLWWGLYVAS
201: LPVLKGLEYL VIIGPVFLTL LLLFVSGIPL LEESADKKYG NLGAYRHYKK TTSPLILLPR GVYGYLPIWC KSVFLFEFPL YSRNLPQETT AWDRRNSKKS
301: QRSID
101: IGKLVVFWIF QAVWVWTVSL PVTFVNASNG GRLFQPADVI GWTMWVAGFL IEATADQQKL SFKKCPENKG KWCDVGVWKY SRHPNYFGEM LLWWGLYVAS
201: LPVLKGLEYL VIIGPVFLTL LLLFVSGIPL LEESADKKYG NLGAYRHYKK TTSPLILLPR GVYGYLPIWC KSVFLFEFPL YSRNLPQETT AWDRRNSKKS
301: QRSID
Arabidopsis Description
Protein of unknown function (DUF1295) [Source:TAIR;Acc:AT1G18180]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.