Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- peroxisome 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g118830.2.1 | Tomato | plasma membrane | 67.98 | 56.58 |
| PGSC0003DMT400074062 | Potato | plasma membrane | 62.85 | 55.4 |
| PGSC0003DMT400014451 | Potato | plasma membrane | 69.57 | 55.0 |
| CDX96490 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 51.78 | 53.91 |
| KXG37747 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 60.08 | 51.88 |
| Zm00001d013456_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 58.89 | 51.2 |
| Os03t0708400-01 | Rice | plasma membrane | 58.5 | 50.86 |
| TraesCS4B01G043600.1 | Wheat | extracellular, plasma membrane, vacuole | 54.55 | 47.42 |
| TraesCS4A01G270500.1 | Wheat | extracellular, plasma membrane, vacuole | 54.55 | 47.42 |
| HORVU4Hr1G007090.1 | Barley | extracellular, plasma membrane, vacuole | 54.55 | 47.42 |
| TraesCS4D01G041100.1 | Wheat | extracellular, plasma membrane, vacuole | 54.15 | 47.08 |
| VIT_17s0000g02520.t01 | Wine grape | plasma membrane | 56.52 | 46.58 |
| CDX82058 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 53.75 | 46.42 |
| Bra008106.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 53.36 | 46.08 |
| Bra015977.1-P | Field mustard | plasma membrane | 52.96 | 46.05 |
| CDY47744 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 52.57 | 45.55 |
| KRH41812 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 52.17 | 45.36 |
| Bra025926.1-P | Field mustard | plasma membrane | 52.17 | 45.21 |
| AT1G73650.3 | Thale cress | plasma membrane | 53.75 | 45.03 |
| CDX72998 | Canola | plasma membrane | 51.78 | 45.02 |
| CDY26182 | Canola | plasma membrane | 51.78 | 44.86 |
| CDY19194 | Canola | plasma membrane | 51.78 | 44.86 |
| KRH60513 | Soybean | plasma membrane | 53.75 | 44.44 |
| AT1G18180.1 | Thale cress | plasma membrane | 52.96 | 43.93 |
| GSMUA_Achr7P11890_001 | Banana | plasma membrane | 55.73 | 43.79 |
| PGSC0003DMT400026984 | Potato | plasma membrane | 20.95 | 16.67 |
| PGSC0003DMT400051424 | Potato | plasma membrane | 16.6 | 13.04 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400014452 | EnsemblPlantsGene:PGSC0003DMG402005669 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF1295 |
| PANTHER:PTHR32251 | PANTHER:PTHR32251:SF15 | PFAM:PF06966 | PGSC:PGSC0003DMG402005669 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000294F753 | UniProt:M1A491 | MapMan:35.2 | : | : | : |
Description
Oxidoreductase, acting on the CH-CH group of donors [Source:PGSC_GENE;Acc:PGSC0003DMG402005669]
Coordinates
chr3:-:58333900..58339785
Molecular Weight (calculated)
29354.9 Da
IEP (calculated)
8.118
GRAVY (calculated)
0.179
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNCRIRDP KCCWPDRILS SNIGLNFELE IHIPDNKSPI VELGYQLTFF IITALFRFDK VTDFAGGTNF IILAILTLVL KGSWHFRQVV LSLFVVIWGL
101: RLGLFLLMRI LQWGEDRRFD DIRDNLGKLA IAWILQAIWV WTVSLPVTVV NASDKQPSVQ TQDIIGWIMW IIGILVEITA DQQKLAFKNS PENRGKWCSV
201: GLWKYSRHPN YFGELFARIN FYLDDIVVEL IRNFCCLQGI DKTSKEAVEQ TRR
101: RLGLFLLMRI LQWGEDRRFD DIRDNLGKLA IAWILQAIWV WTVSLPVTVV NASDKQPSVQ TQDIIGWIMW IIGILVEITA DQQKLAFKNS PENRGKWCSV
201: GLWKYSRHPN YFGELFARIN FYLDDIVVEL IRNFCCLQGI DKTSKEAVEQ TRR
001: MVKVIDSHYL AITAIVTVGY QFIFFVITAL FKFDQVTDFA GSTNFVILAV LTLLLKGTWH YRQIVLTVLV VVWGLRLGLF LLMRILQWGE DRRFDDMREN
101: IGKLVVFWIF QAVWVWTVSL PVTFVNASNG GRLFQPADVI GWTMWVAGFL IEATADQQKL SFKKCPENKG KWCDVGVWKY SRHPNYFGEM LLWWGLYVAS
201: LPVLKGLEYL VIIGPVFLTL LLLFVSGIPL LEESADKKYG NLGAYRHYKK TTSPLILLPR GVYGYLPIWC KSVFLFEFPL YSRNLPQETT A
101: IGKLVVFWIF QAVWVWTVSL PVTFVNASNG GRLFQPADVI GWTMWVAGFL IEATADQQKL SFKKCPENKG KWCDVGVWKY SRHPNYFGEM LLWWGLYVAS
201: LPVLKGLEYL VIIGPVFLTL LLLFVSGIPL LEESADKKYG NLGAYRHYKK TTSPLILLPR GVYGYLPIWC KSVFLFEFPL YSRNLPQETT A
Arabidopsis Description
Protein of unknown function (DUF1295) [Source:TAIR;Acc:AT1G18180]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.