Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G041100.1 | Wheat | extracellular, plasma membrane, vacuole | 98.97 | 98.97 |
| TraesCS4A01G270500.1 | Wheat | extracellular, plasma membrane, vacuole | 98.28 | 98.28 |
| HORVU4Hr1G007090.1 | Barley | extracellular, plasma membrane, vacuole | 96.22 | 96.22 |
| Os03t0708400-01 | Rice | plasma membrane | 87.63 | 87.63 |
| KXG37747 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 87.63 | 87.03 |
| Zm00001d013456_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 86.6 | 86.6 |
| VIT_17s0000g02520.t01 | Wine grape | plasma membrane | 80.07 | 75.9 |
| Solyc06g068970.2.1 | Tomato | nucleus | 73.88 | 74.91 |
| PGSC0003DMT400074062 | Potato | plasma membrane | 72.85 | 73.87 |
| CDX96490 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 60.14 | 72.02 |
| Bra008106.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 71.82 | 71.33 |
| KRH41812 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 70.79 | 70.79 |
| Bra015977.1-P | Field mustard | plasma membrane | 70.79 | 70.79 |
| CDY47744 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.79 | 70.55 |
| GSMUA_Achr7P11890_001 | Banana | plasma membrane | 78.01 | 70.5 |
| CDX72998 | Canola | plasma membrane | 70.45 | 70.45 |
| CDX82058 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 70.79 | 70.31 |
| Bra025926.1-P | Field mustard | plasma membrane | 69.42 | 69.18 |
| CDY26182 | Canola | plasma membrane | 69.07 | 68.84 |
| CDY19194 | Canola | plasma membrane | 69.07 | 68.84 |
| AT1G73650.3 | Thale cress | plasma membrane | 70.45 | 67.88 |
| KRH60513 | Soybean | plasma membrane | 70.79 | 67.32 |
| AT1G18180.1 | Thale cress | plasma membrane | 69.42 | 66.23 |
| Solyc03g118830.2.1 | Tomato | plasma membrane | 68.04 | 65.13 |
| PGSC0003DMT400014451 | Potato | plasma membrane | 69.76 | 63.44 |
| PGSC0003DMT400014452 | Potato | cytosol, golgi, plasma membrane | 47.42 | 54.55 |
| TraesCS2B01G051300.1 | Wheat | plasma membrane | 23.71 | 21.56 |
Protein Annotations
| Gene3D:1.20.120.1630 | InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:35.2 | InterPro:DUF1295 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016627 | InterPro:IPR001104 | PFAM:PF06966 |
| PFscan:PS50244 | PANTHER:PTHR32251 | PANTHER:PTHR32251:SF15 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4B01G043600 | EnsemblPlants:TraesCS4B01G043600.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:31844573..31848825
Molecular Weight (calculated)
32988.6 Da
IEP (calculated)
9.742
GRAVY (calculated)
0.458
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTVLDSHFL ALTALVTVGY QLVFFIITAL LRFDKVTDFA GSTNFVIIAV LTAALKGTWH FRQIVLTVLV IIWGLRLAVF LLMRILQWGE DKRFDEMRSN
101: LGKLAVFWTF QAVWVWTVSL PVTIVNASSR NPSIEARDII GWIMWVIGLS VEAIADQQKL KFKNSPSNRG KWCNVGLWSY TRHPNYFGEM FLWWGVFVAS
201: TPVLSGAEWL VILGPIFLTL LLLFVSGIPL LESSADKRFG RSEEYRTYKK TTSPLIPLPP VVYGALPDWF KVAFLLELPL YNPGPERDPV S
101: LGKLAVFWTF QAVWVWTVSL PVTIVNASSR NPSIEARDII GWIMWVIGLS VEAIADQQKL KFKNSPSNRG KWCNVGLWSY TRHPNYFGEM FLWWGVFVAS
201: TPVLSGAEWL VILGPIFLTL LLLFVSGIPL LESSADKRFG RSEEYRTYKK TTSPLIPLPP VVYGALPDWF KVAFLLELPL YNPGPERDPV S
001: MGTVLDSHFL ALTAIVTVIY QFIFFVITAL FKFDQVTDFA GSTNFVILAV LTLVLKASWH FRQIVLTLLV VVWGLRLGIF LLMRILQWGE DRRFDEQRGN
101: IVRLIIFWTL QAVWVWTVSL PLTLVNASDG GGSLKPADVI GWTMWVFGFL IEAAADQQKL SFKNSPENRG KWCDVGVWKY SRHPNYFGEM LLWWGIFVAA
201: SPVLEGAEYL VIFGPLFLTL LLLFVSGIPL LEASADKKHG NSGAYRSYKK TTSPLILFPR GVYGNLPGWF KTVFLFEFPF YSRNLPQEGR LQNSKEKEVK
301: DD
101: IVRLIIFWTL QAVWVWTVSL PLTLVNASDG GGSLKPADVI GWTMWVFGFL IEAAADQQKL SFKNSPENRG KWCDVGVWKY SRHPNYFGEM LLWWGIFVAA
201: SPVLEGAEYL VIFGPLFLTL LLLFVSGIPL LEASADKKHG NSGAYRSYKK TTSPLILFPR GVYGNLPGWF KTVFLFEFPF YSRNLPQEGR LQNSKEKEVK
301: DD
Arabidopsis Description
Protein of unknown function (DUF1295) [Source:TAIR;Acc:AT1G73650]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.