Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES10337 | Sorghum | plasma membrane | 80.63 | 88.44 |
| HORVU2Hr1G093180.1 | Barley | golgi, mitochondrion, plasma membrane | 49.29 | 83.17 |
| TraesCS2B01G051300.1 | Wheat | plasma membrane | 72.65 | 79.69 |
| TraesCS2A01G038000.1 | Wheat | plasma membrane | 73.22 | 78.83 |
| TraesCS2D01G037000.1 | Wheat | plasma membrane | 71.79 | 78.02 |
| HORVU2Hr1G005680.1 | Barley | endoplasmic reticulum, plasma membrane | 73.79 | 74.43 |
| Os04t0105300-01 | Rice | cytosol, nucleus, plastid | 56.98 | 69.69 |
| VIT_15s0048g02220.t01 | Wine grape | plasma membrane | 58.12 | 63.55 |
| PGSC0003DMT400026984 | Potato | plasma membrane | 57.27 | 63.21 |
| Solyc02g063390.2.1 | Tomato | plasma membrane | 56.98 | 62.89 |
| KRH06317 | Soybean | plasma membrane | 57.83 | 62.46 |
| KRH47737 | Soybean | plasma membrane | 57.83 | 62.46 |
| AT2G46890.1 | Thale cress | plasma membrane | 56.98 | 62.11 |
| GSMUA_Achr1P00860_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 62.68 | 61.45 |
| CDX80055 | Canola | plasma membrane | 56.7 | 61.42 |
| Bra004499.1-P | Field mustard | plasma membrane | 56.41 | 61.11 |
| KRG97275 | Soybean | mitochondrion | 54.42 | 60.25 |
| PGSC0003DMT400051424 | Potato | plasma membrane | 51.28 | 55.9 |
| Solyc01g005320.2.1 | Tomato | plasma membrane | 51.0 | 55.59 |
| Zm00001d013456_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 19.94 | 24.05 |
Protein Annotations
| Gene3D:1.20.120.1630 | InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:35.2 | UniProt:A0A1D6J2R1 | ProteinID:AQK42328.1 | InterPro:DUF1295 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016627 |
| GO:GO:0055114 | InterPro:IPR001104 | PFAM:PF06966 | PFscan:PS50244 | PANTHER:PTHR32251 | PANTHER:PTHR32251:SF14 |
| TMHMM:TMhelix | UniParc:UPI0008446812 | EnsemblPlantsGene:Zm00001d024925 | EnsemblPlants:Zm00001d024925_P001 | EnsemblPlants:Zm00001d024925_T001 | SEG:seg |
Description
No Description!
Coordinates
chr10:-:95280553..95281923
Molecular Weight (calculated)
40678.5 Da
IEP (calculated)
9.692
GRAVY (calculated)
0.125
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGSSLKNM VVAFLVPLPS ILFYLSFVRA GGDTGASPLA SWCAAHPLVL ANVLFFLNVD VLFWLVGLLL SNHWVSKHYT ANTLARNLFD AMPTRLLLYL
101: SPEQLIDLYW TVIPVMLLHY YRGHPASVAD AARSAVAVAL TWAWSARLTH NYLRREGWEL GKREDWRFNE MRAQYGNTWW WMSFFAVYLS QQVFLIGICL
201: PMYAIHSSNQ PWGVWDLVAA ATCVAGILIA HFADTQLHRF VTRNEKLKRL GEPTVPTLED GLWRYSRHPN YFGEQLWWWG LYLFAWNLGQ RWMFLGPLVN
301: SLCLGYVTVL VERRMLKQEH RAEAYKLYQK RTSVWIPWFR KAVPESKLKE T
101: SPEQLIDLYW TVIPVMLLHY YRGHPASVAD AARSAVAVAL TWAWSARLTH NYLRREGWEL GKREDWRFNE MRAQYGNTWW WMSFFAVYLS QQVFLIGICL
201: PMYAIHSSNQ PWGVWDLVAA ATCVAGILIA HFADTQLHRF VTRNEKLKRL GEPTVPTLED GLWRYSRHPN YFGEQLWWWG LYLFAWNLGQ RWMFLGPLVN
301: SLCLGYVTVL VERRMLKQEH RAEAYKLYQK RTSVWIPWFR KAVPESKLKE T
001: MNRNLRNAIV AFLAPLPSIV FYLTFLSNYS SSSDSELSSI QSWCLNHPLL LANLLFFLNV NVLFWVIGLL QSSHWMIDVY WTVIPVMLVH YFASHPLSQY
101: NKLRSMIVIT LTWIWSIRLT HNYFRRENWE WGAREDWRFN DLRKQYGKHW WWLSFFSVYV SQQIFLIGIC LPLYVIHSID EPLNIWDFIS SAICLTGIVM
201: AYFADTQLHE FVTGNQKLKE QGKPKIPNLD SGLWRYSRHP NYLGEQLWWW GLVIFAWNLG QGWTLIGALV NTLCLVYVTI LVERRMVKQQ YRAEAYRAYQ
301: KTTSVWIPWF KSHAAATKDK NT
101: NKLRSMIVIT LTWIWSIRLT HNYFRRENWE WGAREDWRFN DLRKQYGKHW WWLSFFSVYV SQQIFLIGIC LPLYVIHSID EPLNIWDFIS SAICLTGIVM
201: AYFADTQLHE FVTGNQKLKE QGKPKIPNLD SGLWRYSRHP NYLGEQLWWW GLVIFAWNLG QGWTLIGALV NTLCLVYVTI LVERRMVKQQ YRAEAYRAYQ
301: KTTSVWIPWF KSHAAATKDK NT
Arabidopsis Description
3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) [Source:UniProtKB/TrEMBL;Acc:O81042]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.