Factsheet for Os04t0105300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G093180.1	Barley	golgi, mitochondrion, plasma membrane	57.84	79.81
EES10337	Sorghum	plasma membrane	69.69	62.5
TraesCS2B01G051300.1	Wheat	plasma membrane	65.51	58.75
TraesCS2D01G037000.1	Wheat	plasma membrane	65.51	58.2
TraesCS2A01G038000.1	Wheat	plasma membrane	65.85	57.98
Zm00001d024925_P001	Maize	plasma membrane	69.69	56.98
HORVU2Hr1G005680.1	Barley	endoplasmic reticulum, plasma membrane	66.2	54.6
VIT_15s0048g02220.t01	Wine grape	plasma membrane	54.01	48.29
CDX80055	Canola	plasma membrane	54.01	47.84
Bra004499.1-P	Field mustard	plasma membrane	53.66	47.53
Solyc02g063390.2.1	Tomato	plasma membrane	52.61	47.48
GSMUA_Achr1P00860_001	Banana	cytosol, endoplasmic reticulum, peroxisome	58.88	47.21
PGSC0003DMT400026984	Potato	plasma membrane	51.92	46.86
AT2G46890.1	Thale cress	plasma membrane	51.92	46.27
KRH47737	Soybean	plasma membrane	51.92	45.85
KRH06317	Soybean	plasma membrane	51.57	45.54
KRG97275	Soybean	mitochondrion	46.34	41.96
PGSC0003DMT400051424	Potato	plasma membrane	45.3	40.37
Solyc01g005320.2.1	Tomato	plasma membrane	45.3	40.37
Os03t0708400-01	Rice	plasma membrane	25.09	24.74

Protein Annotations

Gene3D:1.20.120.1630	InterPro:3-oxo-5_a-steroid_4-DH_C	MapMan:35.2	ProteinID:BAF13922.1	ProteinID:BAS87530.1	InterPro:DUF1295
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016627
GO:GO:0055114	InterPro:IPR001104	EnsemblPlantsGene:Os04g0105300	EnsemblPlants:Os04t0105300-01	PFAM:PF06966	PFscan:PS50244
PANTHER:PTHR32251	PANTHER:PTHR32251:SF14	UniProt:Q0JFG5	TMHMM:TMhelix	UniParc:UPI0000DD8F05	SEG:seg

Description

Protein of unknown function DUF1295 family protein. (Os04t0105300-01);Similar to B0616E02-H0507E05.2 protein. (Os04t0105300-02)

Coordinates

chr4:+:354021..355335

Molecular Weight (calculated)

33591.3 Da

IEP (calculated)

10.279

GRAVY (calculated)

-0.398

Length

287 amino acids

Sequence
(BLAST)

001: TPLNSQQEEA EASIQSNRGH GRRREEHGHR HPRPSPFPPL LLLFRPPHPA AVADTARSAV AVALTWVWSA RLTHNYLRRE GWQWGKREDW RFAEMRGQYG
101: RAWWWMSFFA VYLSQQVFLI GICLPMYAIH STTQPWGAWD VVATMACLAG IVIAHFADTQ LHRFVTTNEK LKKVGEPTVL TMEAGLWRYS RHPNYFGEQL
201: WWWGLYLFAW NIGQPWMVVG PLVNSLCLGY VTVLVERRMV KQEHRAEAYK LYQKRTSVWI PWFRKPVPQP YNHKDSSNQN SLKISHS

Best Arabidopsis Sequence Match ( AT2G46890.1 )
(BLAST)

001: MNRNLRNAIV AFLAPLPSIV FYLTFLSNYS SSSDSELSSI QSWCLNHPLL LANLLFFLNV NVLFWVIGLL QSSHWMIDVY WTVIPVMLVH YFASHPLSQY
101: NKLRSMIVIT LTWIWSIRLT HNYFRRENWE WGAREDWRFN DLRKQYGKHW WWLSFFSVYV SQQIFLIGIC LPLYVIHSID EPLNIWDFIS SAICLTGIVM
201: AYFADTQLHE FVTGNQKLKE QGKPKIPNLD SGLWRYSRHP NYLGEQLWWW GLVIFAWNLG QGWTLIGALV NTLCLVYVTI LVERRMVKQQ YRAEAYRAYQ
301: KTTSVWIPWF KSHAAATKDK NT

Arabidopsis Description

3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) [Source:UniProtKB/TrEMBL;Acc:O81042]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.