Factsheet for HORVU2Hr1G093180.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi

Predictor Summary:

golgi 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane
MultiLoc:	golgi
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46890.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G037000.1	Wheat	plasma membrane	98.08	63.16
TraesCS2B01G051300.1	Wheat	plasma membrane	96.63	62.81
TraesCS2A01G038000.1	Wheat	plasma membrane	97.6	62.27
HORVU2Hr1G005680.1	Barley	endoplasmic reticulum, plasma membrane	100.0	59.77
Os04t0105300-01	Rice	cytosol, nucleus, plastid	79.81	57.84
EES10337	Sorghum	plasma membrane	83.65	54.38
Zm00001d024925_P001	Maize	plasma membrane	83.17	49.29
VIT_15s0048g02220.t01	Wine grape	plasma membrane	68.75	44.55
CDX80055	Canola	plasma membrane	68.75	44.14
Bra004499.1-P	Field mustard	plasma membrane	68.27	43.83
KRH47737	Soybean	plasma membrane	68.27	43.69
KRH06317	Soybean	plasma membrane	67.79	43.38
Solyc02g063390.2.1	Tomato	plasma membrane	65.87	43.08
AT2G46890.1	Thale cress	plasma membrane	66.35	42.86
PGSC0003DMT400026984	Potato	plasma membrane	64.42	42.14
KRG97275	Soybean	mitochondrion	62.5	41.01
GSMUA_Achr1P00860_001	Banana	cytosol, endoplasmic reticulum, peroxisome	70.19	40.78
PGSC0003DMT400051424	Potato	plasma membrane	61.54	39.75
Solyc01g005320.2.1	Tomato	plasma membrane	59.62	38.51
HORVU4Hr1G007090.1	Barley	extracellular, plasma membrane, vacuole	29.81	21.31

Protein Annotations

Gene3D:1.20.120.1630	InterPro:3-oxo-5_a-steroid_4-DH_C	MapMan:35.2	UniProt:A0A287IZ00	InterPro:DUF1295	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016627	GO:GO:0055114
EnsemblPlantsGene:HORVU2Hr1G093180	EnsemblPlants:HORVU2Hr1G093180.1	InterPro:IPR001104	PFAM:PF06966	PFscan:PS50244	PANTHER:PTHR32251
PANTHER:PTHR32251:SF14	TMHMM:TMhelix	UniParc:UPI000B485EDA	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:657190748..657192350

Molecular Weight (calculated)

24955.1 Da

IEP (calculated)

9.017

GRAVY (calculated)

-0.274

Length

208 amino acids

Sequence
(BLAST)

001: WSARLTHNYF RREGWQWGKQ EDWRFSEMRG QYGKTWWWMS FFAVYLSQQV FLIGICLPMY AIHSSDQPLG IWDLVATMVC IAGVVIAYFA DTQLHEFVTR
101: NEKMKQLGEP TVPTLEDGLW GYSRHPNYFG EQLWWWGVYL FAWNLGQRWM FIGALVNSMC LGYVTVLVER RMLKQEHRAE AYRLYQKRTS VLIPWFRKSI
201: PEPKEKET

Best Arabidopsis Sequence Match ( AT2G46890.1 )
(BLAST)

001: MNRNLRNAIV AFLAPLPSIV FYLTFLSNYS SSSDSELSSI QSWCLNHPLL LANLLFFLNV NVLFWVIGLL QSSHWMIDVY WTVIPVMLVH YFASHPLSQY
101: NKLRSMIVIT LTWIWSIRLT HNYFRRENWE WGAREDWRFN DLRKQYGKHW WWLSFFSVYV SQQIFLIGIC LPLYVIHSID EPLNIWDFIS SAICLTGIVM
201: AYFADTQLHE FVTGNQKLKE QGKPKIPNLD SGLWRYSRHP NYLGEQLWWW GLVIFAWNLG QGWTLIGALV NTLCLVYVTI LVERRMVKQQ YRAEAYRAYQ
301: KTTSVWIPWF KSHAAATKDK NT

Arabidopsis Description

3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) [Source:UniProtKB/TrEMBL;Acc:O81042]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.