Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80055 | Canola | plasma membrane | 88.82 | 88.27 |
| Bra004499.1-P | Field mustard | plasma membrane | 88.51 | 87.96 |
| Solyc02g063390.2.1 | Tomato | plasma membrane | 69.25 | 70.13 |
| PGSC0003DMT400026984 | Potato | plasma membrane | 68.32 | 69.18 |
| VIT_15s0048g02220.t01 | Wine grape | plasma membrane | 68.63 | 68.85 |
| KRH47737 | Soybean | plasma membrane | 68.32 | 67.69 |
| KRH06317 | Soybean | plasma membrane | 68.01 | 67.38 |
| HORVU2Hr1G093180.1 | Barley | golgi, mitochondrion, plasma membrane | 42.86 | 66.35 |
| EES10337 | Sorghum | plasma membrane | 63.04 | 63.44 |
| KRG97275 | Soybean | mitochondrion | 62.42 | 63.41 |
| TraesCS2B01G051300.1 | Wheat | plasma membrane | 62.11 | 62.5 |
| TraesCS2A01G038000.1 | Wheat | plasma membrane | 62.73 | 61.96 |
| TraesCS2D01G037000.1 | Wheat | plasma membrane | 61.8 | 61.61 |
| PGSC0003DMT400051424 | Potato | plasma membrane | 59.01 | 59.01 |
| GSMUA_Achr1P00860_001 | Banana | cytosol, endoplasmic reticulum, peroxisome | 64.6 | 58.1 |
| Solyc01g005320.2.1 | Tomato | plasma membrane | 58.07 | 58.07 |
| Zm00001d024925_P001 | Maize | plasma membrane | 62.11 | 56.98 |
| HORVU2Hr1G005680.1 | Barley | endoplasmic reticulum, plasma membrane | 61.49 | 56.9 |
| Os04t0105300-01 | Rice | cytosol, nucleus, plastid | 46.27 | 51.92 |
| AT1G73650.3 | Thale cress | plasma membrane | 21.74 | 23.18 |
| AT1G18180.1 | Thale cress | plasma membrane | 21.43 | 22.62 |
Protein Annotations
| Gene3D:1.20.120.1630 | InterPro:3-oxo-5_a-steroid_4-DH_C | MapMan:35.2 | EntrezGene:819302 | ProteinID:AAC34231.1 | ProteinID:AAM15024.1 |
| ProteinID:AEC10768.1 | EMBL:AK117460 | ArrayExpress:AT2G46890 | EnsemblPlantsGene:AT2G46890 | RefSeq:AT2G46890 | TAIR:AT2G46890 |
| RefSeq:AT2G46890-TAIR-G | EnsemblPlants:AT2G46890.1 | TAIR:AT2G46890.1 | Unigene:At.36436 | EMBL:BT020410 | InterPro:DUF1295 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016627 |
| GO:GO:0055114 | InterPro:IPR001104 | RefSeq:NP_182212.1 | UniProt:O81042 | PFAM:PF06966 | PO:PO:0000293 |
| PFscan:PS50244 | PANTHER:PTHR32251 | PANTHER:PTHR32251:SF14 | TMHMM:TMhelix | UniParc:UPI00000AC667 | SEG:seg |
Description
3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) [Source:UniProtKB/TrEMBL;Acc:O81042]
Coordinates
chr2:-:19266664..19268195
Molecular Weight (calculated)
38119.2 Da
IEP (calculated)
9.461
GRAVY (calculated)
0.105
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRNLRNAIV AFLAPLPSIV FYLTFLSNYS SSSDSELSSI QSWCLNHPLL LANLLFFLNV NVLFWVIGLL QSSHWMIDVY WTVIPVMLVH YFASHPLSQY
101: NKLRSMIVIT LTWIWSIRLT HNYFRRENWE WGAREDWRFN DLRKQYGKHW WWLSFFSVYV SQQIFLIGIC LPLYVIHSID EPLNIWDFIS SAICLTGIVM
201: AYFADTQLHE FVTGNQKLKE QGKPKIPNLD SGLWRYSRHP NYLGEQLWWW GLVIFAWNLG QGWTLIGALV NTLCLVYVTI LVERRMVKQQ YRAEAYRAYQ
301: KTTSVWIPWF KSHAAATKDK NT
101: NKLRSMIVIT LTWIWSIRLT HNYFRRENWE WGAREDWRFN DLRKQYGKHW WWLSFFSVYV SQQIFLIGIC LPLYVIHSID EPLNIWDFIS SAICLTGIVM
201: AYFADTQLHE FVTGNQKLKE QGKPKIPNLD SGLWRYSRHP NYLGEQLWWW GLVIFAWNLG QGWTLIGALV NTLCLVYVTI LVERRMVKQQ YRAEAYRAYQ
301: KTTSVWIPWF KSHAAATKDK NT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.