CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23487	Canola	cytosol, mitochondrion, nucleus	94.81	94.81
Bra003947.1-P	Field mustard	cytosol, mitochondrion, plastid	92.92	89.55
CDY09470	Canola	nucleus	68.4	52.92
CDY69855	Canola	nucleus	65.09	50.37
CDX96270	Canola	cytosol	59.43	47.73
CDY11556	Canola	nucleus	54.25	43.23
AT1G70700.3	Thale cress	cytosol	50.47	38.77
CDY72405	Canola	plastid	17.45	23.87
CDX95570	Canola	plastid	16.04	22.67
CDX95810	Canola	nucleus	33.96	21.49
CDX92171	Canola	nucleus	32.55	20.54
CDY18478	Canola	nucleus	32.55	19.55
GSMUA_Achr7P12530_001	Banana	nucleus	32.55	16.83
GSMUA_Achr9P15630_001	Banana	cytosol	31.6	16.34
GSMUA_Achr5P05900_001	Banana	nucleus	27.36	13.98

Protein Annotations

EnsemblPlants:CDX68335	EnsemblPlantsGene:GSBRNA2T00099637001	InterPro:CCT_CS	InterPro:IPR010399	InterPro:Tify_dom	PANTHER:PTHR33077
PANTHER:PTHR33077:SF37	PFAM:PF06200	PFAM:PF09425	PFscan:PS51320	ProteinID:CDX68335	ProteinID:CDX68335.1
SEG:seg	SMART:SM00979	UniParc:UPI0004EDFB87	MapMan:15.5.45	:	:

Description

BnaA07g23750D

Coordinates

chrLK031787:-:5093782..5095235

Molecular Weight (calculated)

23409.7 Da

IEP (calculated)

9.121

GRAVY (calculated)

-0.533

Length

212 amino acids

Sequence
(BLAST)

001: MERDFLGFSD KQYLNNVKDD RVGERGSSTK AARQWGPESA ASIHRRSQYS GAFQNANPQL TIFYAGTVSV FNDISPDKAQ AIMICAGNGL KIDTGESRLK
101: KPLIETERVY GKQFHNAATA AASSSSATYC DNFSRCGDRP VDATNAMSMI ESFNVDPGYM MPSVPQARKA SLARFLEKRR ERLMNAMPYK KMLLDLLTGE
201: SCGMNYSSAS HT

Best Arabidopsis Sequence Match ( AT1G70700.1 )
(BLAST)

001: MERDFLGLSD KQYLSNNVKH EVNDDAVEER GLSTKAAREW GKSKVFATSS FMPSSDFQEA KAFPGAYQWG SVSAANVFRR CQFGGAFQNA TPLLLGGSVP
101: LPTHPSLVPR VASSGSSPQL TIFYGGTISV FNDISPDKAQ AIMLCAGNGL KGETGDSKPV REAERMYGKQ IHNTAATSSS SATHTDNFSR CRDTPVAATN
201: AMSMIESFNA APRNMIPSVP QARKASLARF LEKRKERLMS AMPYKKMLLD LSTGESSGMN YSSTSPT

Arabidopsis Description

JAZ9TIFY domain/Divergent CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8API7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.