Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007937.1-P | Field mustard | nucleus | 89.05 | 97.6 |
| CDY09470 | Canola | nucleus | 93.43 | 93.43 |
| CDX96270 | Canola | cytosol | 69.71 | 72.35 |
| CDY23487 | Canola | cytosol, mitochondrion, nucleus | 51.82 | 66.98 |
| CDX68335 | Canola | mitochondrion, nucleus, plastid | 50.37 | 65.09 |
| CDY11556 | Canola | nucleus | 62.41 | 64.29 |
| AT1G70700.3 | Thale cress | cytosol | 54.38 | 53.99 |
| CDY72405 | Canola | plastid | 15.33 | 27.1 |
| CDX95570 | Canola | plastid | 14.23 | 26.0 |
| CDX95810 | Canola | nucleus | 29.93 | 24.48 |
| CDX92171 | Canola | nucleus | 28.47 | 23.21 |
| CDY18478 | Canola | nucleus | 29.2 | 22.66 |
| GSMUA_Achr7P12530_001 | Banana | nucleus | 28.1 | 18.78 |
| GSMUA_Achr9P15630_001 | Banana | cytosol | 26.28 | 17.56 |
| GSMUA_Achr5P05900_001 | Banana | nucleus | 26.28 | 17.35 |
Protein Annotations
| EnsemblPlants:CDY69855 | EnsemblPlantsGene:GSBRNA2T00093072001 | InterPro:CCT_CS | InterPro:IPR010399 | InterPro:Tify_dom | PANTHER:PTHR33077 |
| PANTHER:PTHR33077:SF37 | PFAM:PF06200 | PFAM:PF09425 | PFscan:PS51320 | ProteinID:CDY69855 | ProteinID:CDY69855.1 |
| SEG:seg | SMART:SM00979 | UniParc:UPI0004EE444B | UniProt:A0A078JTU2 | MapMan:15.5.45 | : |
Description
BnaCnng65670DBnaCnng65670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JTU2]
Coordinates
chrLK040508:-:1307..3653
Molecular Weight (calculated)
29343.8 Da
IEP (calculated)
10.434
GRAVY (calculated)
-0.372
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MERDFLGLSD KKYLSNVKRE ANDDRVGERV LSKKAAIQWG KAKLLPNSSF MPDFQAGSYQ RGPVSAASNL RRSQFSGGAF QNANPLLLGG SVPLTNHSSF
101: RPAFNLSADA RVASSGSLPQ LTIFYGGTVS VFNNISPDKA QAIMLCARNG LKGETGESSL KKPVQETERV YGKQVHNAAA AAASSSSATY ADSFSRCRDI
201: PVGATNAMSM IESFNAAGPG NMIPSVPQAR KASLARFLEK RKERLMSALP YKKMLLDLST GESSGMNYSS ASHT
101: RPAFNLSADA RVASSGSLPQ LTIFYGGTVS VFNNISPDKA QAIMLCARNG LKGETGESSL KKPVQETERV YGKQVHNAAA AAASSSSATY ADSFSRCRDI
201: PVGATNAMSM IESFNAAGPG NMIPSVPQAR KASLARFLEK RKERLMSALP YKKMLLDLST GESSGMNYSS ASHT
001: MERDFLGLSD KQYLSNNVKH EVNDDAVEER GLSTKAAREW GKSKVFATSS FMPSSDFQEA KAFPGAYQWG SVSAANVFRR CQFGGAFQNA TPLLLGGSVP
101: LPTHPSLVPR VASSGSSPQL TIFYGGTISV FNDISPDKAQ AIMLCAGNGL KGETGDSKPV REAERMYGKQ IHNTAATSSS SATHTDNFSR CRDTPVAATN
201: AMSMIESFNA APRNMIPSVP QARKASLARF LEKRKERLMS AMPYKKMLLD LSTGESSGMN YSSTSPT
101: LPTHPSLVPR VASSGSSPQL TIFYGGTISV FNDISPDKAQ AIMLCAGNGL KGETGDSKPV REAERMYGKQ IHNTAATSSS SATHTDNFSR CRDTPVAATN
201: AMSMIESFNA APRNMIPSVP QARKASLARF LEKRKERLMS AMPYKKMLLD LSTGESSGMN YSSTSPT
Arabidopsis Description
JAZ9TIFY domain/Divergent CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8API7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.