Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007937.1-P | Field mustard | nucleus | 53.99 | 59.6 |
| Bra016193.1-P | Field mustard | nucleus | 53.26 | 59.04 |
| CDX96270 | Canola | cytosol | 52.54 | 54.92 |
| CDY69855 | Canola | nucleus | 53.99 | 54.38 |
| CDY09470 | Canola | nucleus | 52.54 | 52.92 |
| CDY23487 | Canola | cytosol, mitochondrion, nucleus | 39.49 | 51.42 |
| CDX68335 | Canola | mitochondrion, nucleus, plastid | 38.77 | 50.47 |
| CDY11556 | Canola | nucleus | 47.83 | 49.62 |
| Bra003947.1-P | Field mustard | cytosol, mitochondrion, plastid | 39.13 | 49.09 |
| AT1G48500.1 | Thale cress | nucleus | 27.9 | 24.84 |
| AT3G17860.1 | Thale cress | nucleus | 25.36 | 19.89 |
| GSMUA_Achr9P15630_001 | Banana | cytosol | 26.81 | 18.05 |
| GSMUA_Achr7P12530_001 | Banana | nucleus | 26.09 | 17.56 |
| GSMUA_Achr5P05900_001 | Banana | nucleus | 25.0 | 16.63 |
| Zm00001d032009_P001 | Maize | plastid | 7.97 | 16.42 |
| TraesCS5A01G533100.1 | Wheat | nucleus | 17.03 | 15.56 |
| EER98873 | Sorghum | nucleus | 22.83 | 15.44 |
| TraesCS5B01G203400.2 | Wheat | nucleus | 23.19 | 15.38 |
| TraesCS5D01G211200.2 | Wheat | nucleus | 23.19 | 15.31 |
| TraesCSU01G139100.1 | Wheat | nucleus | 19.57 | 15.3 |
| Os08t0428400-01 | Rice | nucleus | 23.55 | 15.22 |
| TraesCS5A01G204900.1 | Wheat | nucleus | 22.46 | 15.16 |
| TraesCS4B01G364700.1 | Wheat | nucleus | 19.2 | 14.97 |
| Zm00001d050365_P006 | Maize | nucleus | 23.55 | 14.84 |
| Zm00001d020409_P002 | Maize | nucleus | 22.1 | 14.77 |
| EES15016 | Sorghum | cytosol | 22.46 | 14.49 |
| TraesCSU01G139000.1 | Wheat | nucleus | 18.84 | 14.44 |
| TraesCS5A01G533000.1 | Wheat | nucleus | 17.39 | 13.52 |
| HORVU5Hr1G060730.3 | Barley | plastid | 20.29 | 13.05 |
| HORVU4Hr1G087520.3 | Barley | plastid | 15.22 | 12.14 |
| Zm00001d005726_P001 | Maize | endoplasmic reticulum, peroxisome, plasma membrane | 21.01 | 10.76 |
Protein Annotations
| MapMan:15.5.45 | EntrezGene:843407 | UniProt:A0A178WMP7 | UniProt:A0A1P8API7 | ProteinID:ANM58563.1 | ArrayExpress:AT1G70700 |
| EnsemblPlantsGene:AT1G70700 | RefSeq:AT1G70700 | TAIR:AT1G70700 | RefSeq:AT1G70700-TAIR-G | EnsemblPlants:AT1G70700.3 | InterPro:CCT_CS |
| InterPro:IPR010399 | Symbol:JAZ9 | RefSeq:NP_001320988.1 | ProteinID:OAP18783.1 | PFAM:PF06200 | PFAM:PF09425 |
| PFscan:PS51320 | PANTHER:PTHR33077 | PANTHER:PTHR33077:SF37 | SMART:SM00979 | Symbol:TIFY7 | InterPro:Tify_dom |
| UniParc:UPI0007E15AC4 | SEG:seg | : | : | : | : |
Description
JAZ9TIFY domain/Divergent CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8API7]
Coordinates
chr1:+:26654768..26657064
Molecular Weight (calculated)
30327.8 Da
IEP (calculated)
7.452
GRAVY (calculated)
-0.300
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MERDFLGLSD KQYLSNNVKH EVNDDAVEER GLSTKAAREW GKSKVFATSS FMPSSDFQEA KAFPGAYQWG SVSAANVFRR CQFGGAFQNA TPLLLGGSVP
101: LPTHPSLVPR VASSGSSPQL TIFYGGTISV FNDISPDKAQ AIMLCAGNGL KGETGDSKPV REAERMYGKQ IHNTAATSSS SATHTDNFSR CRDTPVAATN
201: AMSMIESFNA APRNMIPSVP QARKASLARF LEKRKERFDF VFFFFIENFE VFQLNLKELM LLVQAYECNA IQEDAS
101: LPTHPSLVPR VASSGSSPQL TIFYGGTISV FNDISPDKAQ AIMLCAGNGL KGETGDSKPV REAERMYGKQ IHNTAATSSS SATHTDNFSR CRDTPVAATN
201: AMSMIESFNA APRNMIPSVP QARKASLARF LEKRKERFDF VFFFFIENFE VFQLNLKELM LLVQAYECNA IQEDAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.