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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96270 Canola cytosol 89.16 84.09
Bra007937.1-P Field mustard nucleus 74.3 74.0
Bra003947.1-P Field mustard cytosol, mitochondrion, plastid 47.79 54.09
AT1G70700.3 Thale cress cytosol 59.04 53.26
Bra021281.1-P Field mustard nucleus 28.51 20.11
Bra022254.1-P Field mustard nucleus 26.51 19.7
GSMUA_Achr7P12530_001 Banana nucleus 28.92 17.56
GSMUA_Achr9P15630_001 Banana cytosol 28.11 17.07
GSMUA_Achr5P05900_001 Banana nucleus 27.71 16.63
Zm00001d032009_P001 Maize plastid 8.43 15.67
TraesCS4B01G364700.1 Wheat nucleus 22.09 15.54
TraesCS5B01G203400.2 Wheat nucleus 25.7 15.38
EES15016 Sorghum cytosol 26.1 15.19
TraesCS5A01G204900.1 Wheat nucleus 24.9 15.16
TraesCS5D01G211200.2 Wheat nucleus 25.3 15.07
Zm00001d050365_P006 Maize nucleus 26.51 15.07
Zm00001d020409_P002 Maize nucleus 24.9 15.01
EER98873 Sorghum nucleus 24.1 14.71
TraesCS5A01G533100.1 Wheat nucleus 17.67 14.57
Os08t0428400-01 Rice nucleus 24.9 14.52
TraesCSU01G139000.1 Wheat nucleus 20.88 14.44
TraesCSU01G139100.1 Wheat nucleus 20.08 14.16
TraesCS5A01G533000.1 Wheat nucleus 19.28 13.52
HORVU5Hr1G060730.3 Barley plastid 22.09 12.82
HORVU4Hr1G087520.3 Barley plastid 16.87 12.14
Zm00001d005726_P001 Maize endoplasmic reticulum, peroxisome, plasma membrane 24.5 11.32
Protein Annotations
EnsemblPlants:Bra016193.1EnsemblPlants:Bra016193.1-PEnsemblPlantsGene:Bra016193InterPro:CCT_CSInterPro:IPR010399InterPro:Tify_dom
PANTHER:PTHR33077PANTHER:PTHR33077:SF37PFAM:PF06200PFAM:PF09425PFscan:PS51320SEG:seg
SMART:SM00979UniParc:UPI00025412C3UniProt:M4DI66MapMan:15.5.45::
Description
AT1G70700 (E=1e-063) JAZ9, TIFY7 | TIFY7
Coordinates
chrA07:+:18948622..18950631
Molecular Weight (calculated)
26981.0 Da
IEP (calculated)
10.505
GRAVY (calculated)
-0.458
Length
249 amino acids
Sequence
(BLAST)
001: MERDFLGLSD KQYLNNVKPD VDDDRVGERG LSKKIAKQWG KAKLLPNSSF MPAAVDLQWC PVSAASIHRR SQFGGGAFQN ANQLLLGGSV PLTNHSALRP
101: AFNSSRDPRV ASSGSSPQLT IFYAGTVTVF NDISPEKARA IMLCAGNGLQ GENGESSLKK PLRETERVFY GKQIHKATAA ASSSSATNAD SFSRCKDKHV
201: GATNAMTMTI ESFNAGPSNM IPSVPQARKA SLARFLEKRK ERFDSSLRL
Best Arabidopsis Sequence Match ( AT1G70700.1 )
(BLAST)
001: MERDFLGLSD KQYLSNNVKH EVNDDAVEER GLSTKAAREW GKSKVFATSS FMPSSDFQEA KAFPGAYQWG SVSAANVFRR CQFGGAFQNA TPLLLGGSVP
101: LPTHPSLVPR VASSGSSPQL TIFYGGTISV FNDISPDKAQ AIMLCAGNGL KGETGDSKPV REAERMYGKQ IHNTAATSSS SATHTDNFSR CRDTPVAATN
201: AMSMIESFNA APRNMIPSVP QARKASLARF LEKRKERLMS AMPYKKMLLD LSTGESSGMN YSSTSPT
Arabidopsis Description
JAZ9TIFY domain/Divergent CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8API7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.