CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016193.1-P	Field mustard	nucleus	84.09	89.16
CDY11556	Canola	nucleus	79.92	79.32
CDY69855	Canola	nucleus	72.35	69.71
CDY09470	Canola	nucleus	68.56	66.06
CDX68335	Canola	mitochondrion, nucleus, plastid	47.73	59.43
CDY23487	Canola	cytosol, mitochondrion, nucleus	47.35	58.96
AT1G70700.3	Thale cress	cytosol	54.92	52.54
CDY72405	Canola	plastid	14.39	24.52
CDX95570	Canola	plastid	13.26	23.33
CDX95810	Canola	nucleus	29.55	23.28
CDX92171	Canola	nucleus	27.27	21.43
CDY18478	Canola	nucleus	27.65	20.68
GSMUA_Achr7P12530_001	Banana	nucleus	28.41	18.29
GSMUA_Achr9P15630_001	Banana	cytosol	28.41	18.29
GSMUA_Achr5P05900_001	Banana	nucleus	26.89	17.11

Protein Annotations

EnsemblPlants:CDX96270	EnsemblPlantsGene:GSBRNA2T00102403001	InterPro:CCT_CS	InterPro:IPR010399	InterPro:Tify_dom	PANTHER:PTHR33077
PANTHER:PTHR33077:SF37	PFAM:PF06200	PFAM:PF09425	PFscan:PS51320	ProteinID:CDX96270	ProteinID:CDX96270.1
SEG:seg	SMART:SM00979	UniParc:UPI0004EDE148	MapMan:15.5.45	:	:

Description

BnaA07g28810D

Coordinates

chrLK031894:+:25226..27734

Molecular Weight (calculated)

28387.8 Da

IEP (calculated)

10.331

GRAVY (calculated)

-0.435

Length

264 amino acids

Sequence
(BLAST)

001: MERDFLGLSD KQYLNNVKPD DDRVGERGLS KKIAKQWGKA KLLPNSSFMP AAADLQCCPV SAASIHRRSQ FGGGAFQNAN QLLLGGSVPL TNHYALRPAF
101: NSSRDPRVAS SGSSPQLAIF YAGTVTVFND ISPDKARAIM LCAGNGLQGE TGESNLKKPL RETERVYGKQ IHKATAAASS SSATNADSFS RCKDKHVGAT
201: NAMTMTIESF NAGPSNMIPS VPQARKASLA RFLEKRKERI MSAMPYKKML LDLSTGESSA ASHT

Best Arabidopsis Sequence Match ( AT1G70700.1 )
(BLAST)

001: MERDFLGLSD KQYLSNNVKH EVNDDAVEER GLSTKAAREW GKSKVFATSS FMPSSDFQEA KAFPGAYQWG SVSAANVFRR CQFGGAFQNA TPLLLGGSVP
101: LPTHPSLVPR VASSGSSPQL TIFYGGTISV FNDISPDKAQ AIMLCAGNGL KGETGDSKPV REAERMYGKQ IHNTAATSSS SATHTDNFSR CRDTPVAATN
201: AMSMIESFNA APRNMIPSVP QARKASLARF LEKRKERLMS AMPYKKMLLD LSTGESSGMN YSSTSPT

Arabidopsis Description

JAZ9TIFY domain/Divergent CCT motif family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8API7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.