Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20749 | Canola | plastid | 91.0 | 91.0 |
| Bra035587.1-P | Field mustard | plastid | 90.52 | 90.52 |
| AT5G55710.1 | Thale cress | plastid | 81.52 | 82.3 |
| CDY11985 | Canola | plastid | 83.41 | 81.86 |
| CDY36761 | Canola | plastid | 81.04 | 81.43 |
| VIT_19s0015g00520.t01 | Wine grape | plastid | 66.82 | 67.79 |
| Solyc12g015680.1.1 | Tomato | plastid | 62.56 | 67.01 |
| PGSC0003DMT400089476 | Potato | plastid | 62.56 | 67.01 |
| KRH14228 | Soybean | plastid | 63.03 | 63.03 |
| KRG94625 | Soybean | extracellular | 59.24 | 62.81 |
| KRH73909 | Soybean | plastid | 62.56 | 62.56 |
| Os02t0726600-01 | Rice | extracellular | 37.91 | 58.82 |
| Zm00001d017907_P001 | Maize | plastid | 47.39 | 46.73 |
| TraesCS6B01G317500.1 | Wheat | plastid | 47.87 | 45.91 |
| HORVU6Hr1G072310.1 | Barley | cytosol, mitochondrion, plasma membrane, plastid | 46.45 | 44.14 |
| CDY19809 | Canola | plastid | 36.49 | 39.29 |
| CDX87092 | Canola | plastid | 36.97 | 37.68 |
| KXG30840 | Sorghum | plastid | 46.45 | 36.57 |
Protein Annotations
| EnsemblPlants:CDY06558 | EnsemblPlantsGene:GSBRNA2T00122681001 | GO:A0A078F4F1 | InterPro:Tic20 | PANTHER:PTHR33510 | PANTHER:PTHR33510:SF5 |
| PFAM:PF16166 | ProteinID:CDY06558 | ProteinID:CDY06558.1 | TMHMM:TMhelix | UniParc:UPI0004EED628 | MapMan:35.1 |
Description
BnaC02g12820D
Coordinates
chrLK031971:+:316060..316844
Molecular Weight (calculated)
23763.1 Da
IEP (calculated)
9.135
GRAVY (calculated)
0.471
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISHLVSPL PSLAFFQTGN LTGRSSSLHV NPNPQFSKSR LSRERAATLV LRSKGDDSVD ASDRIISAVC YFYPFFDGIQ YGKFIITQYQ PFQILIQPLF
101: PAIKAFKSFP FNGFLIFIAL YFVVVRNSNF SRYVRFNTMQ AIVLDVLLIF PDLLERSFNP RDGFGLDVVM SLDSTVFLFL LVCLIYGFSA CLFGLTPRLP
201: IVADAADRQV L
101: PAIKAFKSFP FNGFLIFIAL YFVVVRNSNF SRYVRFNTMQ AIVLDVLLIF PDLLERSFNP RDGFGLDVVM SLDSTVFLFL LVCLIYGFSA CLFGLTPRLP
201: IVADAADRQV L
001: MAIISQFFAP LPSLTGTLTL TGRSFLPLNL DTQFPKPRLS RDRAATLVLQ SKGDDSVDAS DRIISAVCYF YPFFDGIQYG KFIITQYQPF QILIQPLFPA
101: IRAFKSFPFN GFLIFITLYF VVVRNPNFSR YVRFNTMQAI VLDVLLIFPD LLERSFNPRD GFGLDVVMSL DSTVFLFLLV SLIYGFSACL FGLTPRLPLV
201: AEAADRQVL
101: IRAFKSFPFN GFLIFITLYF VVVRNPNFSR YVRFNTMQAI VLDVLLIFPD LLERSFNPRD GFGLDVVMSL DSTVFLFLLV SLIYGFSACL FGLTPRLPLV
201: AEAADRQVL
Arabidopsis Description
TIC20-VTic20-V [Source:UniProtKB/TrEMBL;Acc:A0A178URN8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.