CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73909	Soybean	plastid	88.94	83.89
KRH14228	Soybean	plastid	87.94	82.94
VIT_19s0015g00520.t01	Wine grape	plastid	72.36	69.23
Solyc12g015680.1.1	Tomato	plastid	67.34	68.02
PGSC0003DMT400089476	Potato	plastid	67.34	68.02
CDY36761	Canola	plastid	64.32	60.95
AT5G55710.1	Thale cress	plastid	63.32	60.29
CDY20749	Canola	plastid	63.82	60.19
Bra035587.1-P	Field mustard	plastid	63.32	59.72
Bra028963.1-P	Field mustard	plastid	62.81	59.52
CDY06558	Canola	plastid	62.81	59.24
CDY11985	Canola	plastid	63.82	59.07
Os02t0726600-01	Rice	extracellular	39.7	58.09
Zm00001d017907_P001	Maize	plastid	50.25	46.73
HORVU6Hr1G072310.1	Barley	cytosol, mitochondrion, plasma membrane, plastid	47.74	42.79
TraesCS6B01G317500.1	Wheat	plastid	47.24	42.73
KRH00947	Soybean	plastid	36.68	36.32
KXG30840	Sorghum	plastid	47.24	35.07

Protein Annotations

EMBL:ACUP02011997	EnsemblPlants:KRG94625	EnsemblPlantsGene:GLYMA_19G098000	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Tic20	PANTHER:PTHR33510	PANTHER:PTHR33510:SF5	PFAM:PF16166	ProteinID:KRG94625	ProteinID:KRG94625.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0006EDA8C9	UniProt:A0A0R0EUU7	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr19:-:34325167..34327666

Molecular Weight (calculated)

22531.3 Da

IEP (calculated)

9.185

GRAVY (calculated)

0.738

Length

199 amino acids

Sequence
(BLAST)

001: MRIEVLLARV LLLAFLLCSS LLPLLSKLRK PHQLRTLIVA KSNGSDSADV PDRLISALCY FYPFFDCIQY GKYVITQFYP VQAIVQPLVP AIRVFKSFPF
101: NGFLVFLTLY FVVVRNPNFS KYVRFKTMQA VVLDVLLIFP DLLERGFNPK DGLGFDLIIS LDSTVFLFLL VCLIYGSSCL LGQIPRLPIV AEAADRQVL

Best Arabidopsis Sequence Match ( AT5G55710.1 )
(BLAST)

001: MAIISQFFAP LPSLTGTLTL TGRSFLPLNL DTQFPKPRLS RDRAATLVLQ SKGDDSVDAS DRIISAVCYF YPFFDGIQYG KFIITQYQPF QILIQPLFPA
101: IRAFKSFPFN GFLIFITLYF VVVRNPNFSR YVRFNTMQAI VLDVLLIFPD LLERSFNPRD GFGLDVVMSL DSTVFLFLLV SLIYGFSACL FGLTPRLPLV
201: AEAADRQVL

Arabidopsis Description

TIC20-VTic20-V [Source:UniProtKB/TrEMBL;Acc:A0A178URN8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.