Factsheet for HORVU6Hr1G072310.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G317500.1	Wheat	plastid	87.39	88.18
Os02t0726600-01	Rice	extracellular	52.25	85.29
Zm00001d017907_P001	Maize	plastid	72.97	75.7
KXG30840	Sorghum	plastid	69.37	57.46
Solyc12g015680.1.1	Tomato	plastid	44.14	49.75
Bra028963.1-P	Field mustard	plastid	46.85	49.52
CDY36761	Canola	plastid	46.4	49.05
VIT_19s0015g00520.t01	Wine grape	plastid	45.95	49.04
AT5G55710.1	Thale cress	plastid	45.95	48.8
PGSC0003DMT400089476	Potato	plastid	43.24	48.73
CDY20749	Canola	plastid	45.95	48.34
CDY11985	Canola	plastid	46.4	47.91
KRG94625	Soybean	extracellular	42.79	47.74
KRH14228	Soybean	plastid	45.05	47.39
KRH73909	Soybean	plastid	45.05	47.39
CDY06558	Canola	plastid	44.14	46.45
Bra035587.1-P	Field mustard	plastid	44.14	46.45

Protein Annotations

EnsemblPlants:HORVU6Hr1G072310.1	EnsemblPlantsGene:HORVU6Hr1G072310	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Tic20
PANTHER:PTHR33510	PANTHER:PTHR33510:SF5	PFAM:PF16166	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B47B441
UniProt:A0A287UMM1	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:502529735..502530403

Molecular Weight (calculated)

23538.0 Da

IEP (calculated)

10.263

GRAVY (calculated)

0.564

Length

222 amino acids

Sequence
(BLAST)

001: RASAVSLLLS SPCPLRRAAP SLLSPPAPRL RLPLLGPAPA AATALLTRRP HGLLAPPPRA NNDNSDAVGA PDRLVAAVAY LYPFLDGAHH GRFLVAQYPV
101: FNALLSPLGP AARLFHSSPL TPFLLFITLY FAVVRNQQAF SRFVRFNAMQ AVALDVLLIV PDLLAQSFAP SGGGIGLDIF TSLENTVFLF LLVSLVYGGG
201: ACLLGITPRL PIVADAAERQ VM

Best Arabidopsis Sequence Match ( AT5G55710.1 )
(BLAST)

001: MAIISQFFAP LPSLTGTLTL TGRSFLPLNL DTQFPKPRLS RDRAATLVLQ SKGDDSVDAS DRIISAVCYF YPFFDGIQYG KFIITQYQPF QILIQPLFPA
101: IRAFKSFPFN GFLIFITLYF VVVRNPNFSR YVRFNTMQAI VLDVLLIFPD LLERSFNPRD GFGLDVVMSL DSTVFLFLLV SLIYGFSACL FGLTPRLPLV
201: AEAADRQVL

Arabidopsis Description

TIC20-VTic20-V [Source:UniProtKB/TrEMBL;Acc:A0A178URN8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.