Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14228 | Soybean | plastid | 96.68 | 96.68 |
| KRG94625 | Soybean | extracellular | 83.89 | 88.94 |
| VIT_19s0015g00520.t01 | Wine grape | plastid | 71.56 | 72.6 |
| Solyc12g015680.1.1 | Tomato | plastid | 65.4 | 70.05 |
| PGSC0003DMT400089476 | Potato | plastid | 65.4 | 70.05 |
| CDY36761 | Canola | plastid | 63.51 | 63.81 |
| AT5G55710.1 | Thale cress | plastid | 63.03 | 63.64 |
| CDY11985 | Canola | plastid | 64.45 | 63.26 |
| CDY20749 | Canola | plastid | 63.03 | 63.03 |
| Bra035587.1-P | Field mustard | plastid | 62.56 | 62.56 |
| CDY06558 | Canola | plastid | 62.56 | 62.56 |
| Bra028963.1-P | Field mustard | plastid | 61.61 | 61.9 |
| Os02t0726600-01 | Rice | extracellular | 37.44 | 58.09 |
| Zm00001d017907_P001 | Maize | plastid | 47.87 | 47.2 |
| TraesCS6B01G317500.1 | Wheat | plastid | 47.39 | 45.45 |
| HORVU6Hr1G072310.1 | Barley | cytosol, mitochondrion, plasma membrane, plastid | 47.39 | 45.05 |
| KRH00947 | Soybean | plastid | 35.07 | 36.82 |
| KXG30840 | Sorghum | plastid | 45.5 | 35.82 |
Protein Annotations
| EMBL:ACUP02001290 | EnsemblPlants:KRH73909 | EnsemblPlantsGene:GLYMA_02G300300 | EntrezGene:100777912 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Tic20 | PANTHER:PTHR33510 | PANTHER:PTHR33510:SF5 | PFAM:PF16166 | ProteinID:KRH73909 |
| ProteinID:KRH73909.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002337576 | UniProt:I1JJJ6 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr2:+:47676198..47678171
Molecular Weight (calculated)
23618.2 Da
IEP (calculated)
9.379
GRAVY (calculated)
0.535
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSFLCPA AFTFSQKPLQ STFLHSSSLL TLSILPKKLR KPHQLRSLIV AKSNGSDSAD VPDRLISALC YFYPFFDGIQ YGKYVITQFY PVQAIVQPLV
101: PAIRVFKSFP FNGFLVFLTL YFVVVRNPNF SKYVRFNTMQ AVVLDVLLIF PDLLERGFNP KDGLGLDLIM SLDSTVFLFL LVCLIYGSSS CLLGQIPRLP
201: IVAEAADRQV L
101: PAIRVFKSFP FNGFLVFLTL YFVVVRNPNF SKYVRFNTMQ AVVLDVLLIF PDLLERGFNP KDGLGLDLIM SLDSTVFLFL LVCLIYGSSS CLLGQIPRLP
201: IVAEAADRQV L
001: MAIISQFFAP LPSLTGTLTL TGRSFLPLNL DTQFPKPRLS RDRAATLVLQ SKGDDSVDAS DRIISAVCYF YPFFDGIQYG KFIITQYQPF QILIQPLFPA
101: IRAFKSFPFN GFLIFITLYF VVVRNPNFSR YVRFNTMQAI VLDVLLIFPD LLERSFNPRD GFGLDVVMSL DSTVFLFLLV SLIYGFSACL FGLTPRLPLV
201: AEAADRQVL
101: IRAFKSFPFN GFLIFITLYF VVVRNPNFSR YVRFNTMQAI VLDVLLIFPD LLERSFNPRD GFGLDVVMSL DSTVFLFLLV SLIYGFSACL FGLTPRLPLV
201: AEAADRQVL
Arabidopsis Description
TIC20-VTic20-V [Source:UniProtKB/TrEMBL;Acc:A0A178URN8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.