CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03760	Canola	cytosol	86.03	83.7
CDY68732	Canola	cytosol	36.87	54.1
CDY16248	Canola	cytosol	51.4	48.17
CDY60798	Canola	cytosol	50.28	46.88
Os02t0741900-01	Rice	cytosol	41.34	40.88
AT1G70220.1	Thale cress	cytosol	50.28	40.18
KRG99265	Soybean	endoplasmic reticulum	41.34	39.78
KRH45736	Soybean	endoplasmic reticulum	41.34	39.78
TraesCS6B01G338900.1	Wheat	cytosol	40.22	39.78
TraesCS6D01G288600.1	Wheat	cytosol	40.22	39.78
GSMUA_Achr9P14520_001	Banana	plastid	35.2	39.62
EES05545	Sorghum	cytosol	40.22	39.56
VIT_01s0026g00750.t01	Wine grape	cytosol	36.87	39.52
GSMUA_Achr3P06060_001	Banana	cytosol, peroxisome, plastid	41.34	38.54
Zm00001d052276_P005	Maize	cytosol	40.22	34.78
Solyc04g025670.2.1	Tomato	plastid	19.55	32.11
HORVU6Hr1G076310.1	Barley	plastid	34.64	24.22

Protein Annotations

EnsemblPlants:CDY59944	EnsemblPlantsGene:GSBRNA2T00027912001	InterPro:Anticodon-binding_dom	PANTHER:PTHR13542	PFAM:PF09793	ProteinID:CDY59944
ProteinID:CDY59944.1	SMART:SM00995	UniParc:UPI0004EDACF0	UniProt:A0A078J658	MapMan:35.2	:

Description

BnaAnng16350DBnaAnng16350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J658]

Coordinates

chrLK033823:-:15510..17282

Molecular Weight (calculated)

19544.4 Da

IEP (calculated)

8.314

GRAVY (calculated)

-0.383

Length

179 amino acids

Sequence
(BLAST)

001: MNPANATATE AGGGDEYEVG KTYEVKLTTG IEFKGIVLAY DSDPHGTSRG NCKSMTTRTV NASFISKANL IGKCKDPLDA NKKKCFVDLN GLLEKEAIAI
101: RKIESIGVGV TAEAQKIFDA LSKTLHVKWE NKDMVIMEDV RICSPYHSDF VTGGTRAAND RIKKVLNNVR EKLQLSSDT

Best Arabidopsis Sequence Match ( AT1G24050.1 )
(BLAST)

001: MDPAGASVAS AIGGEGEKFA VGNIYSVKVI TGDEFRGIVM AYDPIPNFVF FEEGTKPRPG HLKNTRMVNA SFITGLSYLG KTEDPLDSDN FSVDLNGLRA
101: KEALAIRQAE ADAERMGVGV TAEAQSIFDA LSKTLPVQWE NSDILVMKEV RVRSPYLSDC VFGGTDAANN RVKKVLELER RRLQLFGT

Arabidopsis Description

At1g24050/T23E23_11 [Source:UniProtKB/TrEMBL;Acc:Q8L466]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.