Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G24050.1 | EES19410 | AT1G04290.1 | 21798944 |
| AT1G24050.1 | EES07517 | AT3G48150.1 | 21798944 |
| AT1G24050.1 | EES00066 | AT4G30330.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0741900-01 | Rice | cytosol | 90.11 | 90.61 |
| TraesCS6D01G288600.1 | Wheat | cytosol | 89.01 | 89.5 |
| TraesCS6B01G338900.1 | Wheat | cytosol | 89.01 | 89.5 |
| Zm00001d052276_P005 | Maize | cytosol | 96.7 | 85.02 |
| GSMUA_Achr9P14520_001 | Banana | plastid | 57.14 | 65.41 |
| GSMUA_Achr3P06060_001 | Banana | cytosol, peroxisome, plastid | 66.48 | 63.02 |
| KRG99265 | Soybean | endoplasmic reticulum | 62.64 | 61.29 |
| VIT_01s0026g00750.t01 | Wine grape | cytosol | 56.04 | 61.08 |
| KRH45736 | Soybean | endoplasmic reticulum | 62.09 | 60.75 |
| CDY68732 | Canola | cytosol | 37.91 | 56.56 |
| HORVU6Hr1G076310.1 | Barley | plastid | 73.08 | 51.95 |
| Solyc04g025670.2.1 | Tomato | plastid | 30.22 | 50.46 |
| AT1G24050.1 | Thale cress | cytosol | 48.9 | 47.34 |
| Bra012415.1-P | Field mustard | cytosol | 47.25 | 46.49 |
| CDY60798 | Canola | cytosol | 48.35 | 45.83 |
| CDY16248 | Canola | cytosol | 47.8 | 45.55 |
| CDY59944 | Canola | cytosol | 39.56 | 40.22 |
| CDY03760 | Canola | cytosol | 37.91 | 37.5 |
| Bra007903.1-P | Field mustard | cytosol | 36.81 | 36.41 |
| AT1G70220.1 | Thale cress | cytosol | 33.52 | 27.23 |
Protein Annotations
| EnsemblPlants:EES05545 | EnsemblPlantsGene:SORBI_3004G242100 | EntrezGene:8075724 | InterPro:Anticodon-binding_dom | PANTHER:PTHR13542 | PFAM:PF09793 |
| ProteinID:EES05545 | ProteinID:EES05545.1 | RefSeq:XP_002452569.1 | SEG:seg | SMART:SM00995 | unigene:Sbi.11112 |
| UniParc:UPI0001A853B6 | UniProt:C5XYW7 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:59009681..59015846
Molecular Weight (calculated)
20051.0 Da
IEP (calculated)
4.838
GRAVY (calculated)
-0.223
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAGGEEFAI GVVISAKTTM GEEFEGQIVA FDRPSNLLVI QEVVGRAERG ERRNVRVLKA NYIREFSVVS KGDDPLDPAG CMLDLNAIYA REDAALRQAE
101: IEAERIGVGV TPEAQSIFDA LSKTLPVQWD KTDIVVMKEV RVCSPYLPEN VSGGTAAANE RVKKVIDFER KRLHSRVPGQ FS
101: IEAERIGVGV TPEAQSIFDA LSKTLPVQWD KTDIVVMKEV RVCSPYLPEN VSGGTAAANE RVKKVIDFER KRLHSRVPGQ FS
001: MDPAGASVAS AIGGEGEKFA VGNIYSVKVI TGDEFRGIVM AYDPIPNFVF FEEGTKPRPG HLKNTRMVNA SFITGLSYLG KTEDPLDSDN FSVDLNGLRA
101: KEALAIRQAE ADAERMGVGV TAEAQSIFDA LSKTLPVQWE NSDILVMKEV RVRSPYLSDC VFGGTDAANN RVKKVLELER RRLQLFGT
101: KEALAIRQAE ADAERMGVGV TAEAQSIFDA LSKTLPVQWE NSDILVMKEV RVRSPYLSDC VFGGTDAANN RVKKVLELER RRLQLFGT
Arabidopsis Description
At1g24050/T23E23_11 [Source:UniProtKB/TrEMBL;Acc:Q8L466]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.