Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68732 | Canola | cytosol | 58.51 | 90.16 |
| CDY16248 | Canola | cytosol | 87.23 | 85.86 |
| Bra012415.1-P | Field mustard | cytosol | 83.51 | 84.86 |
| CDY60798 | Canola | cytosol | 86.17 | 84.38 |
| GSMUA_Achr9P14520_001 | Banana | plastid | 43.62 | 51.57 |
| KRH45736 | Soybean | endoplasmic reticulum | 50.53 | 51.08 |
| VIT_01s0026g00750.t01 | Wine grape | cytosol | 44.68 | 50.3 |
| Os02t0741900-01 | Rice | cytosol | 48.4 | 50.28 |
| KRG99265 | Soybean | endoplasmic reticulum | 49.47 | 50.0 |
| EES05545 | Sorghum | cytosol | 47.34 | 48.9 |
| TraesCS6D01G288600.1 | Wheat | cytosol | 46.28 | 48.07 |
| TraesCS6B01G338900.1 | Wheat | cytosol | 46.28 | 48.07 |
| GSMUA_Achr3P06060_001 | Banana | cytosol, peroxisome, plastid | 48.4 | 47.4 |
| Zm00001d052276_P005 | Maize | cytosol | 48.4 | 43.96 |
| AT1G70220.1 | Thale cress | cytosol | 51.6 | 43.3 |
| Solyc04g025670.2.1 | Tomato | plastid | 23.94 | 41.28 |
| HORVU6Hr1G076310.1 | Barley | plastid | 40.96 | 30.08 |
Protein Annotations
| MapMan:35.2 | EntrezGene:839017 | UniProt:A0A178WHV7 | ProteinID:AEE30472.1 | ArrayExpress:AT1G24050 | EnsemblPlantsGene:AT1G24050 |
| RefSeq:AT1G24050 | TAIR:AT1G24050 | RefSeq:AT1G24050-TAIR-G | EnsemblPlants:AT1G24050.1 | TAIR:AT1G24050.1 | EMBL:AY094450 |
| EMBL:AY133572 | InterPro:Anticodon-binding_dom | GO:GO:0003674 | GO:GO:0008150 | RefSeq:NP_173816.2 | ProteinID:OAP16672.1 |
| PFAM:PF09793 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13542 |
| UniProt:Q8L466 | SMART:SM00995 | UniParc:UPI00000AA5F8 | : | : | : |
Description
At1g24050/T23E23_11 [Source:UniProtKB/TrEMBL;Acc:Q8L466]
Coordinates
chr1:+:8506968..8508909
Molecular Weight (calculated)
20492.4 Da
IEP (calculated)
4.905
GRAVY (calculated)
-0.176
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPAGASVAS AIGGEGEKFA VGNIYSVKVI TGDEFRGIVM AYDPIPNFVF FEEGTKPRPG HLKNTRMVNA SFITGLSYLG KTEDPLDSDN FSVDLNGLRA
101: KEALAIRQAE ADAERMGVGV TAEAQSIFDA LSKTLPVQWE NSDILVMKEV RVRSPYLSDC VFGGTDAANN RVKKVLELER RRLQLFGT
101: KEALAIRQAE ADAERMGVGV TAEAQSIFDA LSKTLPVQWE NSDILVMKEV RVRSPYLSDC VFGGTDAANN RVKKVLELER RRLQLFGT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.