Factsheet for GSMUA_Achr10P23830_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	71.39	73.39
GSMUA_Achr10P...	Banana	cytosol	68.94	71.07
GSMUA_Achr10P...	Banana	cytosol	67.57	69.66
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	52.59	68.44
GSMUA_Achr5P06210_001	Banana	cytosol	52.86	55.59
GSMUA_AchrUn_...	Banana	mitochondrion	11.17	55.41
GSMUA_Achr5P24900_001	Banana	cytosol	50.95	54.36
Os02t0208700-00	Rice	cytosol	37.6	44.95
EES06499	Sorghum	cytosol	43.6	42.9
TraesCS6A01G178900.1	Wheat	cytosol	43.32	42.74
TraesCS6B01G206300.1	Wheat	cytosol	43.05	42.47
EER88591	Sorghum	cytosol	44.41	42.34
TraesCS7B01G257400.1	Wheat	cytosol	44.41	42.34
Zm00001d036925_P001	Maize	cytosol	44.14	42.3
Os06t0594400-02	Rice	cytosol	43.87	42.26
TraesCS6D01G165600.1	Wheat	cytosol	40.87	42.25
TraesCS7D01G352400.1	Wheat	cytosol	44.14	42.08
GSMUA_Achr6P28790_001	Banana	cytosol	13.08	29.09
GSMUA_Achr6P06940_001	Banana	cytosol	28.07	27.84

Protein Annotations

EnsemblPlants:GSMUA_Achr10P23830_001	EnsemblPlants:GSMUA_Achr10T23830_001	EnsemblPlantsGene:GSMUA_Achr10G23830_001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box_dom	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PANTHER:PTHR24413	PANTHER:PTHR24413:SF93	PFAM:PF00646	PFAM:PF01344	SEG:seg	SMART:SM00256
SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI000295EFC1	UniProt:M0RKV8	MapMan:9.2.1.1.2	:

Description

Putative F-box/kelch-repeat protein At1g15670 [Source:GMGC_GENE;Acc:GSMUA_Achr10G23830_001]

Coordinates

chr10:-:28375632..28376735

Molecular Weight (calculated)

40079.4 Da

IEP (calculated)

6.156

GRAVY (calculated)

0.046

Length

367 amino acids

Sequence
(BLAST)

001: MEDLIPGLTN DVARECLARV PFIAFPTLCS VCKLWRQELR DPTFHRFRKS TGIAQPVVVV VQSVPDIAQS ARPRPVVYRL VIFEPATGVW SSLPPSPDLP
101: FGPPLFCRLA AVGTELVVVG GWEPRNWATT DKVHVYDFLT GEWRRGSPLP DPLRSFFACA AMHGSDKGCR VVYVAGGHDE NKNALRSAFA YDVTGDSWKP
201: LPDMARERDE CCAVILRGKF LVLGGYSTEA QGMFSRSAEV FDATAGSWGP VEEAVLEKAA WPVTCVAGED GRMYQCTGKE VIVRLEGGAW ATVAELPGEM
301: RLVLNAVAWE GKLMVMGLER SGGSLVANIL DMKATTTMTT PASASWRKVE VPPEYQGRLL GVCCLVI

Best Arabidopsis Sequence Match ( AT1G15670.1 )
(BLAST)

001: MELIPDLPET VAYECLLRSS YKQFPLMASV CKLWQREISL SDFFRHRKAS GHSQELVVLS QARVDPVKEL VSGNKTIPTP VYRISVLELG TGLRSELPPV
101: PGHSNGLPLF CRLVSVGSDL VVLCGLDPVT WRTSDSVFVF SFLTSTWRVG KSMPGGPRSF FACASDSQRN VFVAGGHDED KNAMMSALVY DVAEDRWAFL
201: PDMGRERDEC TAIFHAGKFH VIGGYSTEEQ GQFSKTAESF DVTTWRWSPQ GEEFLSSEMT MWPPICAAGE NGDLYACCRR DLMMMKDDTW YKVGNLPADV
301: CNVSYVAIRR SGNLVVIGSA RYGEPSVGYN WDMSNSRWLK LETHDKYEGH VQAGCFLEI

Arabidopsis Description

F-box/kelch-repeat protein At1g15670 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.