Factsheet for GSMUA_Achr5P24900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	mitochondrion	12.5	58.11
GSMUA_Achr5P06210_001	Banana	cytosol	58.14	57.31
GSMUA_Achr10P...	Banana	cytosol	54.36	50.95
GSMUA_Achr10P...	Banana	cytosol	49.71	48.03
Zm00001d036925_P001	Maize	cytosol	52.03	46.74
TraesCS6A01G178900.1	Wheat	cytosol	50.29	46.51
GSMUA_Achr10P...	Banana	cytosol	48.26	46.5
GSMUA_Achr10P...	Banana	cytosol	47.97	46.35
Os06t0594400-02	Rice	cytosol	51.16	46.19
TraesCS6B01G206300.1	Wheat	cytosol	49.71	45.97
Os02t0208700-00	Rice	cytosol	40.99	45.93
EER88591	Sorghum	cytosol	50.87	45.45
TraesCS6D01G165600.1	Wheat	cytosol	46.51	45.07
TraesCS7B01G257400.1	Wheat	cytosol	50.29	44.94
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	36.63	44.68
TraesCS7D01G352400.1	Wheat	cytosol	49.42	44.16
EES06499	Sorghum	cytosol	47.09	43.43
GSMUA_Achr6P28790_001	Banana	cytosol	13.66	28.48
GSMUA_Achr6P06940_001	Banana	cytosol	29.94	27.84

Protein Annotations

EnsemblPlants:GSMUA_Achr5P24900_001	EnsemblPlants:GSMUA_Achr5T24900_001	EnsemblPlantsGene:GSMUA_Achr5G24900_001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413
PANTHER:PTHR24413:SF93	PFAM:PF01344	PFAM:PF13415	SEG:seg	SMART:SM00612	SUPFAM:SSF117281
SUPFAM:SSF81383	UniParc:UPI00029667C6	UniProt:M0T1G5	MapMan:9.2.1.1.2	:	:

Description

Putative F-box/kelch-repeat protein At1g80440 [Source:GMGC_GENE;Acc:GSMUA_Achr5G24900_001]

Coordinates

chr5:+:26105388..26106485

Molecular Weight (calculated)

37003.1 Da

IEP (calculated)

7.381

GRAVY (calculated)

-0.120

Length

344 amino acids

Sequence
(BLAST)

001: MRRQLLPGLP DDIARECLVR IPYRGFPTAR SVCRLWKREL DSPYFHRIRK AAGLTRSVVA FAQAESAPAT GSSAVKSVGR STPSYRLSLF EPATGAWSLL
101: PPVPGLPHGL PFFCRMAAAE RELVVVGGWD PKTWAASDGV HVYDFATGSW RRGAPVPGPR RSFFACATAS VRGRVAVVVA GGHDEEKNAL RSAMAYDVAS
201: DTWAPLPDMA MERDECRGVC LDGRFYVIGG YSTEAQGRFS RTAEALDTCV VGGDGRLYMS RGDQGAQLSV LDAAGWRAVA EVPGDARVAP ELVAWDGGLM
301: VMGSETHGGA QTGYIMEAGT AMWKKVEVPE EYSGNIHAGC CLEI

Best Arabidopsis Sequence Match ( AT1G80440.1 )
(BLAST)

001: MELIPNLPDD VARECLLRSS YQQFPVIASV CRAWNREVSL SQFLHQRKAS RHSQELLILS QARVDPAGSG KIIATPEYRI SVLESGSGLW TELPPIPGQT
101: KGLPLFCRLV SVGSDLIVLG GLDPITWQAH DSVFVFSFLT SKWRVGATMP GVRRSFFGCA SDSDRTVLVA GGHNEEKCAL TSAMVYDVSE DKWTFLPDMA
201: RERDECKAVF HAGRFHVIGG YATEEQGQFS KTAESFDVST WEWGPLTEDF LDDTGDTVSP PTCVAGGDLY ACWGGDVMMF LNDKWQKVGQ IPADVYNVTY
301: VAVRPGMLIV IGNGKALAGY GEATVGYICD LSSSRWVKLE THGGHVQAGC FLEV

Arabidopsis Description

F-box/kelch-repeat protein At1g80440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.