Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G033940.1 | Barley | cytosol | 58.12 | 63.75 |
| Os06t0199100-01 | Rice | cytosol | 57.39 | 61.73 |
| TraesCS7D01G162800.1 | Wheat | plastid | 58.41 | 55.66 |
| TraesCS7B01G066600.1 | Wheat | plastid | 58.19 | 55.57 |
| TraesCS7A01G161500.1 | Wheat | plastid | 58.04 | 55.36 |
| VIT_16s0039g02570.t01 | Wine grape | plastid | 58.99 | 54.93 |
| Bra022281.1-P | Field mustard | cytosol | 52.03 | 54.73 |
| KXG19540 | Sorghum | plastid | 57.1 | 54.5 |
| Zm00001d045014_P003 | Maize | plastid | 57.17 | 54.41 |
| AT3G18110.1 | Thale cress | plastid | 54.35 | 52.08 |
| KRH27784 | Soybean | plastid | 55.36 | 51.38 |
| Solyc03g096830.2.1 | Tomato | plastid | 53.77 | 50.31 |
| CDX95788 | Canola | cytosol | 12.1 | 46.65 |
| CDX95789 | Canola | cytosol | 22.75 | 41.92 |
| CDX92197 | Canola | cytosol | 2.97 | 26.8 |
| GSMUA_Achr5P04630_001 | Banana | cytosol | 9.78 | 19.88 |
| GSMUA_AchrUn_... | Banana | cytosol, plastid | 12.97 | 17.55 |
| PGSC0003DMT400001470 | Potato | nucleus | 2.17 | 17.05 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 |
| EnsemblPlantsGene:GSMUA_Achr10G31150_001 | EnsemblPlants:GSMUA_Achr10P31150_001 | EnsemblPlants:GSMUA_Achr10T31150_001 | InterPro:IPR002885 | InterPro:IPR011990 | UniProt:M0RMY9 |
| PFAM:PF01535 | PFAM:PF13041 | PFAM:PF13812 | PFAM:PF17177 | InterPro:PPR_long | PFscan:PS51375 |
| PANTHER:PTHR24015 | PANTHER:PTHR24015:SF556 | InterPro:Pentatricopeptide_repeat | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0002967CEA |
| SEG:seg | : | : | : | : | : |
Description
Putative Pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr10G31150_001]
Coordinates
chr10:-:33315147..33323925
Molecular Weight (calculated)
155152.0 Da
IEP (calculated)
6.242
GRAVY (calculated)
-0.113
Length
1380 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAIAVPSPFL PLSSPSPSSS SSSSRCSTFT AAASSSSSSA AAAVPAEPHP RPREFHYPRA DPSVRWPHLK LDDFLGAGAD ELSVQVYNAM MGVYARTGRF
0101: AKVQKLLSSM RDRGLEPDLV SFNTLINAKA KAGSLAPGLA LELLQEVRRS GLRPDAITYN TLISACSRMS NLEDAVSIFK DMEASECQPD LWTYNAMISV
0201: FGRCGMILEA ERLFRELGNR GFSPDAVTYN SLLFAFAKEC DAEKVERLCD EMVRAGFKKD EITYNTIIHM YGKQGRLDLV VQLHDEMKNV GCNPDAVTYT
0301: VLIDSLGKAN RITEAGKVMS EMADAGVRPT LRTFGALICG YAKAGMRVEA EHTFHRMVRA GIKPDHVAYS VMLDIMLRSK EMQKAMVLYR SMMRDGFRPD
0401: QGLYQAMFGI LAKGDDDGKI DEIIKDMEVV CKMSPQEVSR ILVRGGCFFQ GAEMLKKSVS CGFEPDRECL LSILDAFAAS GMQAGALSLL EFLREHAPDS
0501: SSLIMESSIV MLCKNHQLED AMMEYNKMKM LNFGQFGQCC SLYEYMIACF EEAGFLWEAS QLFSDMKFLG LEPSQGIYKS LISIYCKVGF PETAHNVVDQ
0601: ASRAGISFDD TSVSVTLIET YGKLKLWQRA ESFVGKLRLH DFIDRSIWNA LIYAYAESGR YEQARAVFNM MIKNGPSPTV DSINGLMHAL VIDGRLDELF
0701: VVVEELQDMN FKISKSTILI MLDAFIRAGN IFEVKKIYNG MKAAGYLPTM NVYSSMITLL SRGKRVRDVE AMVAEMEEAG FKPDLNIFNS LLKMYTSIED
0801: FRKTLEIYRR IQEAGIELDQ DAYDTLLVMY SRDVRPEEGF TLLNDMRKKG LEPKLDTYKS LLAACCKEQL WEQAEELFKS MQSKGYRLDR SFYHIMMKVY
0901: RNSGDHSKAE NLLFQMEEVG IKPTIATMHM LMVSYGSAGQ PQEAENVLNN LRSSSQELTT LPYSSVIDAY LKVGDYNMGI TKLMEMKKDG VEPDHRIWTC
1001: FIRAASLCEK TNEAMLLLGT LGNNGFDIPI RLLTGKAESL FMEVDHLLEE LGSLEDNASF NFVNALEDLL WAFERRATAL WIFQLAITRN IYRHDVFRVA
1101: EKDWGADFRK MSAGASLVGL TLWLDHMQDA SLQGSPESPK SVVLITGTAE YNMVSLEKTL KAYLWEMGSP FLPCKTRSGV LVAKAHSLRM WLKDSSFCLD
1201: LELKDTTSLP QTNSMKLTEG YFMRAGLVPA FKDIHERLGQ IRPKKFARLA LLSEESRDKV IQADLEGRKE KMEKLKEKAV LPIHTCQASE QLRWDFEEWM
1301: SSGQNAKELW LVSLGFLACC CSSPDYVLKL MIPFALLLHM RMRVSSAWAF ASQIKLAAPV EQGKSFSFHT KYLLAELILQ
0101: AKVQKLLSSM RDRGLEPDLV SFNTLINAKA KAGSLAPGLA LELLQEVRRS GLRPDAITYN TLISACSRMS NLEDAVSIFK DMEASECQPD LWTYNAMISV
0201: FGRCGMILEA ERLFRELGNR GFSPDAVTYN SLLFAFAKEC DAEKVERLCD EMVRAGFKKD EITYNTIIHM YGKQGRLDLV VQLHDEMKNV GCNPDAVTYT
0301: VLIDSLGKAN RITEAGKVMS EMADAGVRPT LRTFGALICG YAKAGMRVEA EHTFHRMVRA GIKPDHVAYS VMLDIMLRSK EMQKAMVLYR SMMRDGFRPD
0401: QGLYQAMFGI LAKGDDDGKI DEIIKDMEVV CKMSPQEVSR ILVRGGCFFQ GAEMLKKSVS CGFEPDRECL LSILDAFAAS GMQAGALSLL EFLREHAPDS
0501: SSLIMESSIV MLCKNHQLED AMMEYNKMKM LNFGQFGQCC SLYEYMIACF EEAGFLWEAS QLFSDMKFLG LEPSQGIYKS LISIYCKVGF PETAHNVVDQ
0601: ASRAGISFDD TSVSVTLIET YGKLKLWQRA ESFVGKLRLH DFIDRSIWNA LIYAYAESGR YEQARAVFNM MIKNGPSPTV DSINGLMHAL VIDGRLDELF
0701: VVVEELQDMN FKISKSTILI MLDAFIRAGN IFEVKKIYNG MKAAGYLPTM NVYSSMITLL SRGKRVRDVE AMVAEMEEAG FKPDLNIFNS LLKMYTSIED
0801: FRKTLEIYRR IQEAGIELDQ DAYDTLLVMY SRDVRPEEGF TLLNDMRKKG LEPKLDTYKS LLAACCKEQL WEQAEELFKS MQSKGYRLDR SFYHIMMKVY
0901: RNSGDHSKAE NLLFQMEEVG IKPTIATMHM LMVSYGSAGQ PQEAENVLNN LRSSSQELTT LPYSSVIDAY LKVGDYNMGI TKLMEMKKDG VEPDHRIWTC
1001: FIRAASLCEK TNEAMLLLGT LGNNGFDIPI RLLTGKAESL FMEVDHLLEE LGSLEDNASF NFVNALEDLL WAFERRATAL WIFQLAITRN IYRHDVFRVA
1101: EKDWGADFRK MSAGASLVGL TLWLDHMQDA SLQGSPESPK SVVLITGTAE YNMVSLEKTL KAYLWEMGSP FLPCKTRSGV LVAKAHSLRM WLKDSSFCLD
1201: LELKDTTSLP QTNSMKLTEG YFMRAGLVPA FKDIHERLGQ IRPKKFARLA LLSEESRDKV IQADLEGRKE KMEKLKEKAV LPIHTCQASE QLRWDFEEWM
1301: SSGQNAKELW LVSLGFLACC CSSPDYVLKL MIPFALLLHM RMRVSSAWAF ASQIKLAAPV EQGKSFSFHT KYLLAELILQ
0001: MAVSAGALAF PALSVRATLN PEIKDEQANI SSTTSSSQKF TYSRASPAVR WPHLNLREIY DSTPSQTLSS PVSPIAGTPD SGDVVDSIAS REEQKTKDET
0101: AVATRRRRVK KMNKVALIKA KDWRERVKFL TDKILSLKSN QFVADILDAR LVQMTPTDYC FVVKSVGQES WQRALEVFEW LNLRHWHSPN ARMVAAILGV
0201: LGRWNQESLA VEIFTRAEPT VGDRVQVYNA MMGVYSRSGK FSKAQELVDA MRQRGCVPDL ISFNTLINAR LKSGGLTPNL AVELLDMVRN SGLRPDAITY
0301: NTLLSACSRD SNLDGAVKVF EDMEAHRCQP DLWTYNAMIS VYGRCGLAAE AERLFMELEL KGFFPDAVTY NSLLYAFARE RNTEKVKEVY QQMQKMGFGK
0401: DEMTYNTIIH MYGKQGQLDL ALQLYKDMKG LSGRNPDAIT YTVLIDSLGK ANRTVEAAAL MSEMLDVGIK PTLQTYSALI CGYAKAGKRE EAEDTFSCML
0501: RSGTKPDNLA YSVMLDVLLR GNETRKAWGL YRDMISDGHT PSYTLYELMI LGLMKENRSD DIQKTIRDME ELCGMNPLEI SSVLVKGECF DLAARQLKVA
0601: ITNGYELEND TLLSILGSYS SSGRHSEAFE LLEFLKEHAS GSKRLITEAL IVLHCKVNNL SAALDEYFAD PCVHGWCFGS STMYETLLHC CVANEHYAEA
0701: SQVFSDLRLS GCEASESVCK SMVVVYCKLG FPETAHQVVN QAETKGFHFA CSPMYTDIIE AYGKQKLWQK AESVVGNLRQ SGRTPDLKTW NSLMSAYAQC
0801: GCYERARAIF NTMMRDGPSP TVESINILLH ALCVDGRLEE LYVVVEELQD MGFKISKSSI LLMLDAFARA GNIFEVKKIY SSMKAAGYLP TIRLYRMMIE
0901: LLCKGKRVRD AEIMVSEMEE ANFKVELAIW NSMLKMYTAI EDYKKTVQVY QRIKETGLEP DETTYNTLII MYCRDRRPEE GYLLMQQMRN LGLDPKLDTY
1001: KSLISAFGKQ KCLEQAEQLF EELLSKGLKL DRSFYHTMMK ISRDSGSDSK AEKLLQMMKN AGIEPTLATM HLLMVSYSSS GNPQEAEKVL SNLKDTEVEL
1101: TTLPYSSVID AYLRSKDYNS GIERLLEMKK EGLEPDHRIW TCFVRAASFS KEKIEVMLLL KALEDIGFDL PIRLLAGRPE LLVSEVDGWF EKLKSIEDNA
1201: ALNFVNALLN LLWAFELRAT ASWVFQLGIK RGIFSLDVFR VADKDWGADF RRLSGGAALV ALTLWLDHMQ DASLEGYPES PKSVVLITGT AEYNGISLDK
1301: TLKACLWEMG SPFLPCKTRT GLLVAKAHSL RMWLKDSPFC FDLELKDSVS LPESNSMDLI DGCFIRRGLV PAFNHIKERL GGFVSPKKFS RLALLPDEMR
1401: ERVIKTDIEG HRQKLEKMKK KKMGNETNGI NTRRKFVRSK
0101: AVATRRRRVK KMNKVALIKA KDWRERVKFL TDKILSLKSN QFVADILDAR LVQMTPTDYC FVVKSVGQES WQRALEVFEW LNLRHWHSPN ARMVAAILGV
0201: LGRWNQESLA VEIFTRAEPT VGDRVQVYNA MMGVYSRSGK FSKAQELVDA MRQRGCVPDL ISFNTLINAR LKSGGLTPNL AVELLDMVRN SGLRPDAITY
0301: NTLLSACSRD SNLDGAVKVF EDMEAHRCQP DLWTYNAMIS VYGRCGLAAE AERLFMELEL KGFFPDAVTY NSLLYAFARE RNTEKVKEVY QQMQKMGFGK
0401: DEMTYNTIIH MYGKQGQLDL ALQLYKDMKG LSGRNPDAIT YTVLIDSLGK ANRTVEAAAL MSEMLDVGIK PTLQTYSALI CGYAKAGKRE EAEDTFSCML
0501: RSGTKPDNLA YSVMLDVLLR GNETRKAWGL YRDMISDGHT PSYTLYELMI LGLMKENRSD DIQKTIRDME ELCGMNPLEI SSVLVKGECF DLAARQLKVA
0601: ITNGYELEND TLLSILGSYS SSGRHSEAFE LLEFLKEHAS GSKRLITEAL IVLHCKVNNL SAALDEYFAD PCVHGWCFGS STMYETLLHC CVANEHYAEA
0701: SQVFSDLRLS GCEASESVCK SMVVVYCKLG FPETAHQVVN QAETKGFHFA CSPMYTDIIE AYGKQKLWQK AESVVGNLRQ SGRTPDLKTW NSLMSAYAQC
0801: GCYERARAIF NTMMRDGPSP TVESINILLH ALCVDGRLEE LYVVVEELQD MGFKISKSSI LLMLDAFARA GNIFEVKKIY SSMKAAGYLP TIRLYRMMIE
0901: LLCKGKRVRD AEIMVSEMEE ANFKVELAIW NSMLKMYTAI EDYKKTVQVY QRIKETGLEP DETTYNTLII MYCRDRRPEE GYLLMQQMRN LGLDPKLDTY
1001: KSLISAFGKQ KCLEQAEQLF EELLSKGLKL DRSFYHTMMK ISRDSGSDSK AEKLLQMMKN AGIEPTLATM HLLMVSYSSS GNPQEAEKVL SNLKDTEVEL
1101: TTLPYSSVID AYLRSKDYNS GIERLLEMKK EGLEPDHRIW TCFVRAASFS KEKIEVMLLL KALEDIGFDL PIRLLAGRPE LLVSEVDGWF EKLKSIEDNA
1201: ALNFVNALLN LLWAFELRAT ASWVFQLGIK RGIFSLDVFR VADKDWGADF RRLSGGAALV ALTLWLDHMQ DASLEGYPES PKSVVLITGT AEYNGISLDK
1301: TLKACLWEMG SPFLPCKTRT GLLVAKAHSL RMWLKDSPFC FDLELKDSVS LPESNSMDLI DGCFIRRGLV PAFNHIKERL GGFVSPKKFS RLALLPDEMR
1401: ERVIKTDIEG HRQKLEKMKK KKMGNETNGI NTRRKFVRSK
Arabidopsis Description
EMB1270Pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5G1S8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.