Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045014_P003 | Maize | plastid | 93.64 | 93.38 |
| HORVU7Hr1G033940.1 | Barley | cytosol | 68.6 | 78.86 |
| Os06t0199100-01 | Rice | cytosol | 68.33 | 77.01 |
| TraesCS7D01G162800.1 | Wheat | plastid | 76.56 | 76.45 |
| TraesCS7B01G066600.1 | Wheat | plastid | 76.28 | 76.33 |
| TraesCS7A01G161500.1 | Wheat | plastid | 76.35 | 76.3 |
| GSMUA_Achr10P... | Banana | plastid | 54.5 | 57.1 |
| CDX95788 | Canola | cytosol | 14.04 | 56.7 |
| VIT_16s0039g02570.t01 | Wine grape | plastid | 56.02 | 54.66 |
| Bra022281.1-P | Field mustard | cytosol | 48.96 | 53.96 |
| KRH27784 | Soybean | plastid | 54.29 | 52.79 |
| AT3G18110.1 | Thale cress | plastid | 52.07 | 52.29 |
| Solyc03g096830.2.1 | Tomato | plastid | 52.63 | 51.59 |
| CDX95789 | Canola | cytosol | 20.54 | 39.65 |
| CDX92197 | Canola | cytosol | 2.77 | 26.14 |
| EES13584 | Sorghum | mitochondrion | 12.45 | 19.11 |
| PGSC0003DMT400001470 | Potato | nucleus | 2.07 | 17.05 |
| OQU75712 | Sorghum | plastid | 7.47 | 15.7 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | UniProt:A0A194YHV0 | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009793 | InterPro:IPR002885 | InterPro:IPR011990 | EnsemblPlants:KXG19540 | ProteinID:KXG19540 | ProteinID:KXG19540.1 |
| PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFAM:PF13812 | PFAM:PF17177 | InterPro:PPR_long |
| PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF556 | InterPro:Pentatricopeptide_repeat | EnsemblPlantsGene:SORBI_3010G074100 | SUPFAM:SSF48452 |
| TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0007F2FE51 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:-:6047416..6053415
Molecular Weight (calculated)
160945.0 Da
IEP (calculated)
6.023
GRAVY (calculated)
-0.109
Length
1446 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSPMAVSSSP LPFLSSSSSF TCHLRRAGTA TATAASSASE DFDYPLADPS VRWPHLRFPH LPAPRFPATV TAAPPVPARP PPQEVEDPAA TSASASAPSL
0101: VEPLDARAHR GRVKKLSKLA LRRAQDWRAR VAGLADAVLA LPPGAPVDDV LDGARATPDE VAFVVRAVGE SSWRRALDAF EWLARSTAPA SRAVAVVLGV
0201: LGRARQDSIA EEVFLRFAGE GATVQVFNAM MGVYARSGRF DDARQLLDTM HDRGIDPDLV SFNTLINARS KSGCLAAGVA LDLLFEVRQS GLRPDVITYN
0301: TLISACSQSS NLEDAVTVFE EMIASECRPD LWTYNAMVSV HGRCGKAEEA ERLFGELVEK GFMPDAVTYN SLLYAFAKEG NVDKVEHTCE ELVKAGFKKN
0401: EITYNTMIHM YGKMGRLDLA VGLYDEMRAV GCTPDAVTYT VMIDSLGKMD KIAEAGKVLE DMADAGLKPT LVAFSALICA YAKGGRRADA EKTFDCMIAS
0501: GVKPDRLAYL VMLDVFARSG ETEKMLRLYR TMMNDNYRPD DDMYQVLLVA LAKEDKCEEI EEIIQDMELL CQMSLGVIST ILIKARCVSQ GGKLLKKACL
0601: QGYKPDAKSL WSIMNAYVMT EKHEEGLSLL ECIRDHVSSS QDLISECSII LLCRKQTSIS AYEQYSQRLM LKYPGQNCNL YEHLITCLVE AELFSEACQV
0701: FCDMQFIGIE ASKNIYESII STYCKLGFPE TAHGLMDDAL QSGIPLNILS CRVIIIEAYG NIKLWQQAEI LVKGLRQASG IDRRIWNALI HAYAESGLYE
0801: KARAVFDNMI KTGPLPTVDS VNGMMRALIV DGRLDELYVV VGELQDMDFK ISKSTVLLML DAFAKAGDVF EVMKIYNGMK AAGYLPNMHL YRSMTSLLCH
0901: HNRFRDVELM IAEMEGAGFK PDLSIFNSLL NMYTAAGNFD RTTQVYQSIL EAGLEPDEDT YNTLIVMYCR SLRPEEGFTL LNEMGKRGLT PKLQSYKSLL
1001: AASAKAELRE QADQLFEEMR SKSYQLNRSI YHMMMKIYRN AGNHSKAENL LAVMKEDGIE PTIATMHILM TSYGTAGQPH EAENVLNSLK SSSLEVSTLP
1101: YSTVFDAYLK NGDYDLGIKK LLEMKRDGVE PDHQVWTCFI RAASLCEQTA DAILLLKSLQ DCGFDLPIRL LTERTPSLLS EIANYLEELE ALEDSAALNF
1201: VNAVEDLLWA FECRATASRI FQLAVERSIY RDNVFRVAQK DWGADFRKLS AGAALVGLTL WLDHMQDASL QGSPESPKSV VLVTGEGEYN MVSLRKTIRA
1301: YLLEMGSPFL PCRARSGRFV VKAYSLKMWL KDSPFCMDLE LKDAPALPKL NSMKLIEGYF MRAGLVSAFK DIHEKLGEVW PKKFSRLALL SEECRDEVIK
1401: ADIKGRKEKL ERMKKKGIVT ARKSKRRAQR GKFVREQEQN MKVVLD
0101: VEPLDARAHR GRVKKLSKLA LRRAQDWRAR VAGLADAVLA LPPGAPVDDV LDGARATPDE VAFVVRAVGE SSWRRALDAF EWLARSTAPA SRAVAVVLGV
0201: LGRARQDSIA EEVFLRFAGE GATVQVFNAM MGVYARSGRF DDARQLLDTM HDRGIDPDLV SFNTLINARS KSGCLAAGVA LDLLFEVRQS GLRPDVITYN
0301: TLISACSQSS NLEDAVTVFE EMIASECRPD LWTYNAMVSV HGRCGKAEEA ERLFGELVEK GFMPDAVTYN SLLYAFAKEG NVDKVEHTCE ELVKAGFKKN
0401: EITYNTMIHM YGKMGRLDLA VGLYDEMRAV GCTPDAVTYT VMIDSLGKMD KIAEAGKVLE DMADAGLKPT LVAFSALICA YAKGGRRADA EKTFDCMIAS
0501: GVKPDRLAYL VMLDVFARSG ETEKMLRLYR TMMNDNYRPD DDMYQVLLVA LAKEDKCEEI EEIIQDMELL CQMSLGVIST ILIKARCVSQ GGKLLKKACL
0601: QGYKPDAKSL WSIMNAYVMT EKHEEGLSLL ECIRDHVSSS QDLISECSII LLCRKQTSIS AYEQYSQRLM LKYPGQNCNL YEHLITCLVE AELFSEACQV
0701: FCDMQFIGIE ASKNIYESII STYCKLGFPE TAHGLMDDAL QSGIPLNILS CRVIIIEAYG NIKLWQQAEI LVKGLRQASG IDRRIWNALI HAYAESGLYE
0801: KARAVFDNMI KTGPLPTVDS VNGMMRALIV DGRLDELYVV VGELQDMDFK ISKSTVLLML DAFAKAGDVF EVMKIYNGMK AAGYLPNMHL YRSMTSLLCH
0901: HNRFRDVELM IAEMEGAGFK PDLSIFNSLL NMYTAAGNFD RTTQVYQSIL EAGLEPDEDT YNTLIVMYCR SLRPEEGFTL LNEMGKRGLT PKLQSYKSLL
1001: AASAKAELRE QADQLFEEMR SKSYQLNRSI YHMMMKIYRN AGNHSKAENL LAVMKEDGIE PTIATMHILM TSYGTAGQPH EAENVLNSLK SSSLEVSTLP
1101: YSTVFDAYLK NGDYDLGIKK LLEMKRDGVE PDHQVWTCFI RAASLCEQTA DAILLLKSLQ DCGFDLPIRL LTERTPSLLS EIANYLEELE ALEDSAALNF
1201: VNAVEDLLWA FECRATASRI FQLAVERSIY RDNVFRVAQK DWGADFRKLS AGAALVGLTL WLDHMQDASL QGSPESPKSV VLVTGEGEYN MVSLRKTIRA
1301: YLLEMGSPFL PCRARSGRFV VKAYSLKMWL KDSPFCMDLE LKDAPALPKL NSMKLIEGYF MRAGLVSAFK DIHEKLGEVW PKKFSRLALL SEECRDEVIK
1401: ADIKGRKEKL ERMKKKGIVT ARKSKRRAQR GKFVREQEQN MKVVLD
0001: MAVSAGALAF PALSVRATLN PEIKDEQANI SSTTSSSQKF TYSRASPAVR WPHLNLREIY DSTPSQTLSS PVSPIAGTPD SGDVVDSIAS REEQKTKDET
0101: AVATRRRRVK KMNKVALIKA KDWRERVKFL TDKILSLKSN QFVADILDAR LVQMTPTDYC FVVKSVGQES WQRALEVFEW LNLRHWHSPN ARMVAAILGV
0201: LGRWNQESLA VEIFTRAEPT VGDRVQVYNA MMGVYSRSGK FSKAQELVDA MRQRGCVPDL ISFNTLINAR LKSGGLTPNL AVELLDMVRN SGLRPDAITY
0301: NTLLSACSRD SNLDGAVKVF EDMEAHRCQP DLWTYNAMIS VYGRCGLAAE AERLFMELEL KGFFPDAVTY NSLLYAFARE RNTEKVKEVY QQMQKMGFGK
0401: DEMTYNTIIH MYGKQGQLDL ALQLYKDMKG LSGRNPDAIT YTVLIDSLGK ANRTVEAAAL MSEMLDVGIK PTLQTYSALI CGYAKAGKRE EAEDTFSCML
0501: RSGTKPDNLA YSVMLDVLLR GNETRKAWGL YRDMISDGHT PSYTLYELMI LGLMKENRSD DIQKTIRDME ELCGMNPLEI SSVLVKGECF DLAARQLKVA
0601: ITNGYELEND TLLSILGSYS SSGRHSEAFE LLEFLKEHAS GSKRLITEAL IVLHCKVNNL SAALDEYFAD PCVHGWCFGS STMYETLLHC CVANEHYAEA
0701: SQVFSDLRLS GCEASESVCK SMVVVYCKLG FPETAHQVVN QAETKGFHFA CSPMYTDIIE AYGKQKLWQK AESVVGNLRQ SGRTPDLKTW NSLMSAYAQC
0801: GCYERARAIF NTMMRDGPSP TVESINILLH ALCVDGRLEE LYVVVEELQD MGFKISKSSI LLMLDAFARA GNIFEVKKIY SSMKAAGYLP TIRLYRMMIE
0901: LLCKGKRVRD AEIMVSEMEE ANFKVELAIW NSMLKMYTAI EDYKKTVQVY QRIKETGLEP DETTYNTLII MYCRDRRPEE GYLLMQQMRN LGLDPKLDTY
1001: KSLISAFGKQ KCLEQAEQLF EELLSKGLKL DRSFYHTMMK ISRDSGSDSK AEKLLQMMKN AGIEPTLATM HLLMVSYSSS GNPQEAEKVL SNLKDTEVEL
1101: TTLPYSSVID AYLRSKDYNS GIERLLEMKK EGLEPDHRIW TCFVRAASFS KEKIEVMLLL KALEDIGFDL PIRLLAGRPE LLVSEVDGWF EKLKSIEDNA
1201: ALNFVNALLN LLWAFELRAT ASWVFQLGIK RGIFSLDVFR VADKDWGADF RRLSGGAALV ALTLWLDHMQ DASLEGYPES PKSVVLITGT AEYNGISLDK
1301: TLKACLWEMG SPFLPCKTRT GLLVAKAHSL RMWLKDSPFC FDLELKDSVS LPESNSMDLI DGCFIRRGLV PAFNHIKERL GGFVSPKKFS RLALLPDEMR
1401: ERVIKTDIEG HRQKLEKMKK KKMGNETNGI NTRRKFVRSK
0101: AVATRRRRVK KMNKVALIKA KDWRERVKFL TDKILSLKSN QFVADILDAR LVQMTPTDYC FVVKSVGQES WQRALEVFEW LNLRHWHSPN ARMVAAILGV
0201: LGRWNQESLA VEIFTRAEPT VGDRVQVYNA MMGVYSRSGK FSKAQELVDA MRQRGCVPDL ISFNTLINAR LKSGGLTPNL AVELLDMVRN SGLRPDAITY
0301: NTLLSACSRD SNLDGAVKVF EDMEAHRCQP DLWTYNAMIS VYGRCGLAAE AERLFMELEL KGFFPDAVTY NSLLYAFARE RNTEKVKEVY QQMQKMGFGK
0401: DEMTYNTIIH MYGKQGQLDL ALQLYKDMKG LSGRNPDAIT YTVLIDSLGK ANRTVEAAAL MSEMLDVGIK PTLQTYSALI CGYAKAGKRE EAEDTFSCML
0501: RSGTKPDNLA YSVMLDVLLR GNETRKAWGL YRDMISDGHT PSYTLYELMI LGLMKENRSD DIQKTIRDME ELCGMNPLEI SSVLVKGECF DLAARQLKVA
0601: ITNGYELEND TLLSILGSYS SSGRHSEAFE LLEFLKEHAS GSKRLITEAL IVLHCKVNNL SAALDEYFAD PCVHGWCFGS STMYETLLHC CVANEHYAEA
0701: SQVFSDLRLS GCEASESVCK SMVVVYCKLG FPETAHQVVN QAETKGFHFA CSPMYTDIIE AYGKQKLWQK AESVVGNLRQ SGRTPDLKTW NSLMSAYAQC
0801: GCYERARAIF NTMMRDGPSP TVESINILLH ALCVDGRLEE LYVVVEELQD MGFKISKSSI LLMLDAFARA GNIFEVKKIY SSMKAAGYLP TIRLYRMMIE
0901: LLCKGKRVRD AEIMVSEMEE ANFKVELAIW NSMLKMYTAI EDYKKTVQVY QRIKETGLEP DETTYNTLII MYCRDRRPEE GYLLMQQMRN LGLDPKLDTY
1001: KSLISAFGKQ KCLEQAEQLF EELLSKGLKL DRSFYHTMMK ISRDSGSDSK AEKLLQMMKN AGIEPTLATM HLLMVSYSSS GNPQEAEKVL SNLKDTEVEL
1101: TTLPYSSVID AYLRSKDYNS GIERLLEMKK EGLEPDHRIW TCFVRAASFS KEKIEVMLLL KALEDIGFDL PIRLLAGRPE LLVSEVDGWF EKLKSIEDNA
1201: ALNFVNALLN LLWAFELRAT ASWVFQLGIK RGIFSLDVFR VADKDWGADF RRLSGGAALV ALTLWLDHMQ DASLEGYPES PKSVVLITGT AEYNGISLDK
1301: TLKACLWEMG SPFLPCKTRT GLLVAKAHSL RMWLKDSPFC FDLELKDSVS LPESNSMDLI DGCFIRRGLV PAFNHIKERL GGFVSPKKFS RLALLPDEMR
1401: ERVIKTDIEG HRQKLEKMKK KKMGNETNGI NTRRKFVRSK
Arabidopsis Description
EMB1270Pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5G1S8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.