Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G033940.1 | Barley | cytosol | 83.49 | 96.1 |
| TraesCS7B01G066600.1 | Wheat | plastid | 95.23 | 95.43 |
| TraesCS7A01G161500.1 | Wheat | plastid | 95.1 | 95.16 |
| Os06t0199100-01 | Rice | cytosol | 71.34 | 80.51 |
| KXG19540 | Sorghum | plastid | 76.45 | 76.56 |
| Zm00001d045014_P003 | Maize | plastid | 75.62 | 75.52 |
| GSMUA_Achr10P... | Banana | plastid | 55.66 | 58.41 |
| CDX95788 | Canola | cytosol | 13.61 | 55.03 |
| VIT_16s0039g02570.t01 | Wine grape | plastid | 54.9 | 53.64 |
| Bra022281.1-P | Field mustard | cytosol | 48.48 | 53.51 |
| AT3G18110.1 | Thale cress | plastid | 51.59 | 51.88 |
| Solyc03g096830.2.1 | Tomato | plastid | 52.49 | 51.53 |
| KRH27784 | Soybean | plastid | 52.9 | 51.51 |
| CDX95789 | Canola | cytosol | 20.17 | 38.99 |
| CDX92197 | Canola | cytosol | 2.62 | 24.84 |
| PGSC0003DMT400001470 | Potato | nucleus | 2.35 | 19.32 |
| TraesCS5D01G229900.1 | Wheat | plastid | 12.29 | 19.18 |
| TraesCS6D01G317500.5 | Wheat | plastid | 13.05 | 18.09 |
| TraesCS7D01G068900.1 | Wheat | cytosol | 9.46 | 17.15 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 |
| InterPro:IPR002885 | InterPro:IPR011990 | PFAM:PF01535 | PFAM:PF12854 | PFAM:PF13041 | PFAM:PF13812 |
| PFAM:PF17177 | InterPro:PPR_long | PFscan:PS51375 | PANTHER:PTHR24015 | PANTHER:PTHR24015:SF556 | InterPro:Pentatricopeptide_repeat |
| SUPFAM:SSF48452 | TIGRFAMs:TIGR00756 | InterPro:TPR-like_helical_dom_sf | EnsemblPlantsGene:TraesCS7D01G162800 | EnsemblPlants:TraesCS7D01G162800.1 | SEG:seg |
Description
No Description!
Coordinates
chr7D:-:112789874..112795791
Molecular Weight (calculated)
160940.0 Da
IEP (calculated)
6.360
GRAVY (calculated)
-0.124
Length
1448 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPLMAVSSPP PFSFPSARHP RRATAGATAA PSATASDDFD YPLADPSVRW PSLRFPHLPA PRFPAADAAP PPPPAPARPG PAEDDSSAPS ASGPSVAAVA
0101: VEPLDARAHR GRLKKLSKLA LRRARDWRER VSDLAGRLLA LPPGAPVAEV LDDAWVSPDE LAYVVRAVGA ASWRRALDAF EWLAASGDGA PGPRVVAVVL
0201: GVLGRARQDG LAEELFLRFA GEGATVQVFN AMMGVYARSG RFDDVRQLLD AMRGQGIEPD LVSFNTLINA SAKSGCLAPG AAFDLLHEVR QAGLRPDVIT
0301: YNTLISACSQ GSILDDAVAV FKEMIDSECR PDLWTYNAMV SVHGRCGTAR EAEQMFMELL DKGFKPDAVT YNSLLHAFAK EGDVDAVERV CEELVKAGFR
0401: KDGITYNTMI HMYGKMGRLD LALGLYDEMR AIGCTPDAVT YTVLIDSLGK VDRISDAGKV LEEMVDAGLK PTLVTFSALI CAYAKGGRRD EAEQTFDRMV
0501: ASGVKPDRLA YLVMLDIIAR SGETKKLMVL YRTMMKDGYV PDDTLYQVML AALAKGNEHE EIEGVMQDME VVCQMDRQLV YSILIKAGCI FQGAKLLKKA
0601: CLQGHEPDSK SLLSILDAYE TMGKHEEGLS LLQCIRENVP SSRNLISECS IMLMCKNQKI AAALQQYSSM QTLKCGSFGH DRNLYECLIT CLAEAEFLPE
0701: ASQVFCDMQF IGIEPSQKIY ESMISTYCKL GFPETAHQLM DEAVQPGVWL NTLSSRVTII EAYGKTKLWQ HAENFVKGLN QEAGVDRRIW NALIHAYAES
0801: GLYEQARAVF DIMIKKGPLP TVDSINGMMR ALITDGRLDE LFVVVQELQD MGFKISKSTV ILMLEAFAKA GDVFEVMKIY NGMKEAGYLP NMHIYRSMIS
0901: LLCRNKRFRD VELMVAEMEA AGFKPDLVIL NTLLLMYTGN GDFDKTVEVY HSILEAGLEP DEDTYNTLIV MYSRNLRPEE GFTLLNEMGK RGLTPRLESY
1001: KSLLVASGKA KLWEQGEQLF EEIRSKGYRL NRSLYHVMMK MYRDTCNHSK AEQLLAAMKE DGIEPTIATM HILMTSYGTA GHPVEAEKVL NSLKSSSLEV
1101: SSLPYSTVFD AYLKNGDYSL GITKLLEMKR DGIKPDHQVW TCFIRAASLC ERTDDAILLL NSLQDCGFGL PIRLLTERTP SLLTEVDSFL EELEALEDSA
1201: ALNFVNALED LLWAFERRAT ASYIFQLAVN RSIYRHSIFR VIEKDWGADF RKLSAGAALV ALTLWLDQMQ DASLQGSPES PKSIVLVTGE GEYNMVSLRK
1301: TIRAYLLEMG SPFLPCRART GRFVAKFYSL KMWLKDSPFC MDLELKDAPA LPKMNSMKLT EGYFMRAGLV STFKDIHEQL GEVRPKKFSR LAMLSEESRA
1401: KFIKADIKGR KDKLERIKEK GLVIPRKSKR GPRRAKFVRE QSTQEVLK
0101: VEPLDARAHR GRLKKLSKLA LRRARDWRER VSDLAGRLLA LPPGAPVAEV LDDAWVSPDE LAYVVRAVGA ASWRRALDAF EWLAASGDGA PGPRVVAVVL
0201: GVLGRARQDG LAEELFLRFA GEGATVQVFN AMMGVYARSG RFDDVRQLLD AMRGQGIEPD LVSFNTLINA SAKSGCLAPG AAFDLLHEVR QAGLRPDVIT
0301: YNTLISACSQ GSILDDAVAV FKEMIDSECR PDLWTYNAMV SVHGRCGTAR EAEQMFMELL DKGFKPDAVT YNSLLHAFAK EGDVDAVERV CEELVKAGFR
0401: KDGITYNTMI HMYGKMGRLD LALGLYDEMR AIGCTPDAVT YTVLIDSLGK VDRISDAGKV LEEMVDAGLK PTLVTFSALI CAYAKGGRRD EAEQTFDRMV
0501: ASGVKPDRLA YLVMLDIIAR SGETKKLMVL YRTMMKDGYV PDDTLYQVML AALAKGNEHE EIEGVMQDME VVCQMDRQLV YSILIKAGCI FQGAKLLKKA
0601: CLQGHEPDSK SLLSILDAYE TMGKHEEGLS LLQCIRENVP SSRNLISECS IMLMCKNQKI AAALQQYSSM QTLKCGSFGH DRNLYECLIT CLAEAEFLPE
0701: ASQVFCDMQF IGIEPSQKIY ESMISTYCKL GFPETAHQLM DEAVQPGVWL NTLSSRVTII EAYGKTKLWQ HAENFVKGLN QEAGVDRRIW NALIHAYAES
0801: GLYEQARAVF DIMIKKGPLP TVDSINGMMR ALITDGRLDE LFVVVQELQD MGFKISKSTV ILMLEAFAKA GDVFEVMKIY NGMKEAGYLP NMHIYRSMIS
0901: LLCRNKRFRD VELMVAEMEA AGFKPDLVIL NTLLLMYTGN GDFDKTVEVY HSILEAGLEP DEDTYNTLIV MYSRNLRPEE GFTLLNEMGK RGLTPRLESY
1001: KSLLVASGKA KLWEQGEQLF EEIRSKGYRL NRSLYHVMMK MYRDTCNHSK AEQLLAAMKE DGIEPTIATM HILMTSYGTA GHPVEAEKVL NSLKSSSLEV
1101: SSLPYSTVFD AYLKNGDYSL GITKLLEMKR DGIKPDHQVW TCFIRAASLC ERTDDAILLL NSLQDCGFGL PIRLLTERTP SLLTEVDSFL EELEALEDSA
1201: ALNFVNALED LLWAFERRAT ASYIFQLAVN RSIYRHSIFR VIEKDWGADF RKLSAGAALV ALTLWLDQMQ DASLQGSPES PKSIVLVTGE GEYNMVSLRK
1301: TIRAYLLEMG SPFLPCRART GRFVAKFYSL KMWLKDSPFC MDLELKDAPA LPKMNSMKLT EGYFMRAGLV STFKDIHEQL GEVRPKKFSR LAMLSEESRA
1401: KFIKADIKGR KDKLERIKEK GLVIPRKSKR GPRRAKFVRE QSTQEVLK
0001: MAVSAGALAF PALSVRATLN PEIKDEQANI SSTTSSSQKF TYSRASPAVR WPHLNLREIY DSTPSQTLSS PVSPIAGTPD SGDVVDSIAS REEQKTKDET
0101: AVATRRRRVK KMNKVALIKA KDWRERVKFL TDKILSLKSN QFVADILDAR LVQMTPTDYC FVVKSVGQES WQRALEVFEW LNLRHWHSPN ARMVAAILGV
0201: LGRWNQESLA VEIFTRAEPT VGDRVQVYNA MMGVYSRSGK FSKAQELVDA MRQRGCVPDL ISFNTLINAR LKSGGLTPNL AVELLDMVRN SGLRPDAITY
0301: NTLLSACSRD SNLDGAVKVF EDMEAHRCQP DLWTYNAMIS VYGRCGLAAE AERLFMELEL KGFFPDAVTY NSLLYAFARE RNTEKVKEVY QQMQKMGFGK
0401: DEMTYNTIIH MYGKQGQLDL ALQLYKDMKG LSGRNPDAIT YTVLIDSLGK ANRTVEAAAL MSEMLDVGIK PTLQTYSALI CGYAKAGKRE EAEDTFSCML
0501: RSGTKPDNLA YSVMLDVLLR GNETRKAWGL YRDMISDGHT PSYTLYELMI LGLMKENRSD DIQKTIRDME ELCGMNPLEI SSVLVKGECF DLAARQLKVA
0601: ITNGYELEND TLLSILGSYS SSGRHSEAFE LLEFLKEHAS GSKRLITEAL IVLHCKVNNL SAALDEYFAD PCVHGWCFGS STMYETLLHC CVANEHYAEA
0701: SQVFSDLRLS GCEASESVCK SMVVVYCKLG FPETAHQVVN QAETKGFHFA CSPMYTDIIE AYGKQKLWQK AESVVGNLRQ SGRTPDLKTW NSLMSAYAQC
0801: GCYERARAIF NTMMRDGPSP TVESINILLH ALCVDGRLEE LYVVVEELQD MGFKISKSSI LLMLDAFARA GNIFEVKKIY SSMKAAGYLP TIRLYRMMIE
0901: LLCKGKRVRD AEIMVSEMEE ANFKVELAIW NSMLKMYTAI EDYKKTVQVY QRIKETGLEP DETTYNTLII MYCRDRRPEE GYLLMQQMRN LGLDPKLDTY
1001: KSLISAFGKQ KCLEQAEQLF EELLSKGLKL DRSFYHTMMK ISRDSGSDSK AEKLLQMMKN AGIEPTLATM HLLMVSYSSS GNPQEAEKVL SNLKDTEVEL
1101: TTLPYSSVID AYLRSKDYNS GIERLLEMKK EGLEPDHRIW TCFVRAASFS KEKIEVMLLL KALEDIGFDL PIRLLAGRPE LLVSEVDGWF EKLKSIEDNA
1201: ALNFVNALLN LLWAFELRAT ASWVFQLGIK RGIFSLDVFR VADKDWGADF RRLSGGAALV ALTLWLDHMQ DASLEGYPES PKSVVLITGT AEYNGISLDK
1301: TLKACLWEMG SPFLPCKTRT GLLVAKAHSL RMWLKDSPFC FDLELKDSVS LPESNSMDLI DGCFIRRGLV PAFNHIKERL GGFVSPKKFS RLALLPDEMR
1401: ERVIKTDIEG HRQKLEKMKK KKMGNETNGI NTRRKFVRSK
0101: AVATRRRRVK KMNKVALIKA KDWRERVKFL TDKILSLKSN QFVADILDAR LVQMTPTDYC FVVKSVGQES WQRALEVFEW LNLRHWHSPN ARMVAAILGV
0201: LGRWNQESLA VEIFTRAEPT VGDRVQVYNA MMGVYSRSGK FSKAQELVDA MRQRGCVPDL ISFNTLINAR LKSGGLTPNL AVELLDMVRN SGLRPDAITY
0301: NTLLSACSRD SNLDGAVKVF EDMEAHRCQP DLWTYNAMIS VYGRCGLAAE AERLFMELEL KGFFPDAVTY NSLLYAFARE RNTEKVKEVY QQMQKMGFGK
0401: DEMTYNTIIH MYGKQGQLDL ALQLYKDMKG LSGRNPDAIT YTVLIDSLGK ANRTVEAAAL MSEMLDVGIK PTLQTYSALI CGYAKAGKRE EAEDTFSCML
0501: RSGTKPDNLA YSVMLDVLLR GNETRKAWGL YRDMISDGHT PSYTLYELMI LGLMKENRSD DIQKTIRDME ELCGMNPLEI SSVLVKGECF DLAARQLKVA
0601: ITNGYELEND TLLSILGSYS SSGRHSEAFE LLEFLKEHAS GSKRLITEAL IVLHCKVNNL SAALDEYFAD PCVHGWCFGS STMYETLLHC CVANEHYAEA
0701: SQVFSDLRLS GCEASESVCK SMVVVYCKLG FPETAHQVVN QAETKGFHFA CSPMYTDIIE AYGKQKLWQK AESVVGNLRQ SGRTPDLKTW NSLMSAYAQC
0801: GCYERARAIF NTMMRDGPSP TVESINILLH ALCVDGRLEE LYVVVEELQD MGFKISKSSI LLMLDAFARA GNIFEVKKIY SSMKAAGYLP TIRLYRMMIE
0901: LLCKGKRVRD AEIMVSEMEE ANFKVELAIW NSMLKMYTAI EDYKKTVQVY QRIKETGLEP DETTYNTLII MYCRDRRPEE GYLLMQQMRN LGLDPKLDTY
1001: KSLISAFGKQ KCLEQAEQLF EELLSKGLKL DRSFYHTMMK ISRDSGSDSK AEKLLQMMKN AGIEPTLATM HLLMVSYSSS GNPQEAEKVL SNLKDTEVEL
1101: TTLPYSSVID AYLRSKDYNS GIERLLEMKK EGLEPDHRIW TCFVRAASFS KEKIEVMLLL KALEDIGFDL PIRLLAGRPE LLVSEVDGWF EKLKSIEDNA
1201: ALNFVNALLN LLWAFELRAT ASWVFQLGIK RGIFSLDVFR VADKDWGADF RRLSGGAALV ALTLWLDHMQ DASLEGYPES PKSVVLITGT AEYNGISLDK
1301: TLKACLWEMG SPFLPCKTRT GLLVAKAHSL RMWLKDSPFC FDLELKDSVS LPESNSMDLI DGCFIRRGLV PAFNHIKERL GGFVSPKKFS RLALLPDEMR
1401: ERVIKTDIEG HRQKLEKMKK KKMGNETNGI NTRRKFVRSK
Arabidopsis Description
EMB1270Pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q5G1S8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.